RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	GHITM	Q9H3K2	345 aa		12.92	□□□□□ -0.34
SUPT20H-223	ENST00000497318	LINC00574	Q9H8X3	128 aa		12.92	□□□□□ -0.34
SUPT20H-223	ENST00000497318	NEK6	Q9HC98	313 aa		12.92	□□□□□ -0.34
SUPT20H-223	ENST00000497318	ISYNA1	Q9NPH2	558 aa		12.92	□□□□□ -0.34
SUPT20H-223	ENST00000497318	FAM53C	Q9NYF3	392 aa		12.92	□□□□□ -0.34
SUPT20H-223	ENST00000497318	VSIG4	Q9Y279	399 aa		12.92	□□□□□ -0.34
SUPT20H-223	ENST00000497318	METTL15	A6NJ78	407 aa		12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	SLC33A1	O00400	549 aa	Predicted RBP	12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	SAP30	O75446	220 aa		12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	KDM4B	O94953	1096 aa		12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	IL1A	P01583	271 aa		12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	UBC	P0CG48	685 aa	Known RBP	12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	ZNF20	P17024	532 aa		12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	HOXB6	P17509	224 aa	Known RBP	12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	PSMB8	P28062	276 aa		12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	SOX6	P35712	828 aa		12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	GNG10	P50151	68 aa		12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	ZNF816	Q0VGE8	651 aa	Predicted RBP	12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	UTS2B	Q765I0	119 aa		12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	IZUMO1	Q8IYV9	350 aa		12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318		Q8N9W7	124 aa		12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	DNAJC9	Q8WXX5	260 aa		12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	OPALIN	Q96PE5	141 aa		12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	TM2D3	Q9BRN9	247 aa		12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	OSBPL10	Q9BXB5	764 aa		12.91	□□□□□ -0.34
SUPT20H-223	ENST00000497318	IGHV1-3	A0A0C4DH29	117 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	IGKV1-9	A0A0C4DH69	117 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	LOC107986453	A0A1B0GWG9	222 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318		G3V2T6	193 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	OVOL1	O14753	267 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	SULT1C4	O75897	302 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	MOS	P00540	346 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	GP9	P14770	177 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	SPN	P16150	400 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	VEGFC	P49767	419 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	RUNX1	Q01196	453 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	CFHR3	Q02985	330 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	ATP6AP1	Q15904	470 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	LTC4S	Q16873	150 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	NXNL2	Q5VZ03	156 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	KDM4D	Q6B0I6	523 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318		Q6P435	159 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	SAXO1	Q8IYX7	474 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318		Q8N6K4	173 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	OR51T1	Q8NGJ9	327 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	OR6Q1	Q8NGQ2	317 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	KCTD7	Q96MP8	289 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	S1PR3	Q99500	378 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	PPIL3	Q9H2H8	161 aa	Known RBP	12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	EDA2R	Q9HAV5	297 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	KIF25	Q9UIL4	384 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	ZNF580	Q9UK33	172 aa		12.9	□□□□□ -0.34
SUPT20H-223	ENST00000497318	IGF1	P05019	195 aa		12.89	□□□□□ -0.35
SUPT20H-223	ENST00000497318	CD1B	P29016	333 aa		12.89	□□□□□ -0.35
SUPT20H-223	ENST00000497318	ZP1	P60852	638 aa		12.89	□□□□□ -0.35
SUPT20H-223	ENST00000497318	ISL1	P61371	349 aa		12.89	□□□□□ -0.35
SUPT20H-223	ENST00000497318	GABPB1	Q06547	395 aa	Predicted RBP	12.89	□□□□□ -0.35
SUPT20H-223	ENST00000497318	PAN3	Q58A45	887 aa	Known RBP	12.89	□□□□□ -0.35
SUPT20H-223	ENST00000497318	RFESD	Q8TAC1	157 aa		12.89	□□□□□ -0.35
SUPT20H-223	ENST00000497318	FGGY	Q96C11	551 aa		12.89	□□□□□ -0.35
SUPT20H-223	ENST00000497318	ADAT3	Q96EY9	351 aa	Predicted RBP	12.89	□□□□□ -0.35
SUPT20H-223	ENST00000497318	CIB1	Q99828	191 aa		12.89	□□□□□ -0.35
SUPT20H-223	ENST00000497318	CSMD3	Q7Z407	3707 aa		12.89	□□□□□ -0.35
SUPT20H-223	ENST00000497318	IGHV3-72	A0A0B4J1Y9	119 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	IGKV1-12	A0A0C4DH73	117 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318		A0A1W2PQL4	384 aa	Predicted RBP	12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	NPIPB11	E5RHQ5	1161 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	IGKV1D-12	P01611	117 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	OR2T7	P0C7T2	308 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	IL3RA	P26951	378 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	HTR1F	P30939	366 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	REG1B	P48304	166 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	TMEM244	Q5VVB8	128 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	GID4	Q8IVV7	300 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	RDH10	Q8IZV5	341 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	PRSS35	Q8N3Z0	413 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	FAM71E2	Q8N5Q1	922 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	OR13A1	Q8NGR1	328 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	MYOZ3	Q8TDC0	251 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	DCUN1D4	Q92564	292 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	RNF166	Q96A37	237 aa	Predicted RBP	12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	RFT1	Q96AA3	541 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	GABARAPL1	Q9H0R8	117 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318	PLSCR3	Q9NRY6	295 aa		12.88	□□□□□ -0.35
SUPT20H-223	ENST00000497318		I3L521	148 aa		12.87	□□□□□ -0.35
SUPT20H-223	ENST00000497318	MT-ND2	P03891	347 aa		12.87	□□□□□ -0.35
SUPT20H-223	ENST00000497318	DBT	P11182	482 aa	Known RBP	12.87	□□□□□ -0.35
SUPT20H-223	ENST00000497318	FAM220A	Q7Z4H9	259 aa		12.87	□□□□□ -0.35
SUPT20H-223	ENST00000497318	ZNF491	Q8N8L2	437 aa		12.87	□□□□□ -0.35
SUPT20H-223	ENST00000497318	OR5D18	Q8NGL1	313 aa		12.87	□□□□□ -0.35
SUPT20H-223	ENST00000497318	IL17D	Q8TAD2	202 aa		12.87	□□□□□ -0.35
SUPT20H-223	ENST00000497318	OR51J1	Q9H342	316 aa		12.87	□□□□□ -0.35
SUPT20H-223	ENST00000497318	FAM118A	Q9NWS6	357 aa		12.87	□□□□□ -0.35
SUPT20H-223	ENST00000497318		A0A1W2PPE3	182 aa		12.86	□□□□□ -0.35
SUPT20H-223	ENST00000497318	TRIM64C	A6NLI5	447 aa		12.86	□□□□□ -0.35
SUPT20H-223	ENST00000497318		H0YJX3	145 aa		12.86	□□□□□ -0.35
SUPT20H-223	ENST00000497318	HSPB6	O14558	160 aa		12.86	□□□□□ -0.35
SUPT20H-223	ENST00000497318	DYNC1I1	O14576	645 aa		12.86	□□□□□ -0.35
SUPT20H-223	ENST00000497318	IFNA6	P05013	189 aa		12.86	□□□□□ -0.35
SUPT20H-223	ENST00000497318	TMEM225B	P0DP42	221 aa		12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms