RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SPEM1Q8N4L4 309 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 B3GALNT2Q8NCR0 500 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 VN1R2Q8NFZ6 395 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 OR52E2Q8NGJ4 325 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 OR4C13Q8NGP0 309 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 OR13A1Q8NGR1 328 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 OR1J4Q8NGS1 313 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 OR1J1Q8NGS3 322 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 HMGCLL1Q8TB92 370 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 PP6455Q8WZ26 134 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 LRRC58Q96CX6 371 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 MEIS3Q99687 375 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 C16orf70Q9BSU1 422 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 OR51E2Q9H255 320 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 PRORYQ9H606 182 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC25A19Q9HC21 320 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 MMP26Q9NRE1 261 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF226Q9NYT6 803 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 FLRT1Q9NZU1 646 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 CYSLTR1Q9Y271 337 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 MRPS16Q9Y3D3 137 aaKnown RBP2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF780BQ9Y6R6 833 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 ADGRB2O60241 1585 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 LRP6O75581 1613 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 TCRBV7S3A2A0A539 114 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 C7orf77A4D0Y5 90 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM235A6NFC5 223 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 CASTOR2A6NHX0 329 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 B4DEV8 164 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 H0YL77 283 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 H3BMH7 237 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 VCYO14598 125 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 AGPAT2O15120 278 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 EEDO75530 441 aaKnown RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 GCM2O75603 506 aaPredicted RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 CSN3P07498 182 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 SP1P08047 785 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 IGLC1P0CG04 106 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 FAM157CP0CG43 387 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 CT45A10P0DMU9 189 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 RPL7P18124 248 aaKnown RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 PSMB1P20618 241 aaKnown RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 SRIP30626 198 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 TSFMP43897 325 aaKnown RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 HNRNPA3P51991 378 aaKnown RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF140P52738 457 aaPredicted RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 RPL27P61353 136 aaKnown RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 HIST1H3AP68431 136 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 H3F3AP84243 136 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 PNOCQ13519 176 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 C1orf61Q13536 156 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 PAFAH1B3Q15102 231 aaKnown RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 RGNQ15493 299 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 MMDQ15546 238 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 HLA-DRB5Q30154 266 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 TIGITQ495A1 244 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 PYDC2Q56P42 97 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 DMRTC1Q5HYR2 192 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 TREML2Q5T2D2 321 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 ALKAL1Q6UXT8 129 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF66Q6ZN08 573 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 Q6ZSR3 168 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 OR5AP2Q8NGF4 316 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 OR5D16Q8NGK9 328 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 OR1L8Q8NGR8 309 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 MFSD8Q8NHS3 518 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 NEIL3Q8TAT5 605 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 FNDC9Q8TBE3 224 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 DOK4Q8TEW6 326 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 MBD3L1Q8WWY6 194 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 LINC00476Q8WZB0 136 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 NDRG1Q92597 394 aaKnown RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 IP6K3Q96PC2 410 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 PITX2Q99697 317 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 ATP5SQ99766 215 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 RASL11BQ9BPW5 248 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 VAMP8Q9BV40 100 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 VN1R3Q9BXE9 311 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 PRRG4Q9BZD6 226 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 COA1Q9GZY4 146 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 MS4A6AQ9H2W1 248 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 ELL3Q9HB65 397 aaPredicted RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 CDH20Q9HBT6 801 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 HEBP1Q9NRV9 189 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM74BQ9NUR3 256 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 ANXA10Q9UJ72 324 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 SIGLEC7Q9Y286 467 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 NSG2Q9Y328 171 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 HDGFL3Q9Y3E1 203 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 RPL36Q9Y3U8 105 aaKnown RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 SUPT6HQ7KZ85 1726 aaKnown RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 IFT172Q9UG01 1749 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 MYH14Q7Z406 1995 aaKnown RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 FRMPD1Q5SYB0 1578 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 EDC4Q6P2E9 1401 aaKnown RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 PIK3C2AO00443 1686 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 A0A1W2PPK0 400 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF705FA8MVS1 300 aaPredicted RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 H3BQ15 152 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms