RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ALDH3A2P51648 485 aa17.47■□□□□ 0.39
HDDC3-203ENST00000494993 PAX5Q02548 391 aa17.47■□□□□ 0.39
HDDC3-203ENST00000494993 LTC4SQ16873 150 aa17.47■□□□□ 0.39
HDDC3-203ENST00000494993 OR8H3Q8N146 312 aa17.47■□□□□ 0.39
HDDC3-203ENST00000494993 PLPPR1Q8TBJ4 325 aa17.47■□□□□ 0.39
HDDC3-203ENST00000494993 MRGPRDQ8TDS7 321 aa17.47■□□□□ 0.39
HDDC3-203ENST00000494993 TSEN15Q8WW01 171 aaKnown RBP17.47■□□□□ 0.39
HDDC3-203ENST00000494993 CPNE2Q96FN4 548 aaPredicted RBP17.47■□□□□ 0.39
HDDC3-203ENST00000494993 NOL4LQ96MY1 436 aaPredicted RBP17.47■□□□□ 0.39
HDDC3-203ENST00000494993 PDCD1LG2Q9BQ51 273 aa17.47■□□□□ 0.39
HDDC3-203ENST00000494993 GABRPO00591 440 aa17.46■□□□□ 0.39
HDDC3-203ENST00000494993 CCDC159P0C7I6 412 aa17.46■□□□□ 0.39
HDDC3-203ENST00000494993 KCNJ3P48549 501 aa17.46■□□□□ 0.39
HDDC3-203ENST00000494993 GNG10P50151 68 aa17.46■□□□□ 0.39
HDDC3-203ENST00000494993 MRPL28Q13084 256 aaKnown RBP17.46■□□□□ 0.39
HDDC3-203ENST00000494993 OR2W3Q7Z3T1 314 aa17.46■□□□□ 0.39
HDDC3-203ENST00000494993 OR10A7Q8NGE5 316 aa17.46■□□□□ 0.39
HDDC3-203ENST00000494993 RFESDQ8TAC1 157 aa17.46■□□□□ 0.39
HDDC3-203ENST00000494993 HAVCR2Q8TDQ0 301 aa17.46■□□□□ 0.39
HDDC3-203ENST00000494993 TNFAIP8L1Q8WVP5 186 aa17.46■□□□□ 0.39
HDDC3-203ENST00000494993 GPER1Q99527 375 aa17.46■□□□□ 0.39
HDDC3-203ENST00000494993 ERVK13-1Q9NX77 482 aa17.46■□□□□ 0.39
HDDC3-203ENST00000494993 GMPPBQ9Y5P6 360 aa17.46■□□□□ 0.39
HDDC3-203ENST00000494993 SERPINE3A8MV23 424 aa17.45■□□□□ 0.38
HDDC3-203ENST00000494993 MAGEB3O15480 346 aa17.45■□□□□ 0.38
HDDC3-203ENST00000494993 FADS2O95864 444 aaKnown RBP17.45■□□□□ 0.38
HDDC3-203ENST00000494993 RAB3AP20336 220 aa17.45■□□□□ 0.38
HDDC3-203ENST00000494993 SSTR5P35346 364 aa17.45■□□□□ 0.38
HDDC3-203ENST00000494993 PIGYQ3MUY2 71 aa17.45■□□□□ 0.38
HDDC3-203ENST00000494993 ZNF529Q6P280 563 aa17.45■□□□□ 0.38
HDDC3-203ENST00000494993 SLC16A12Q6ZSM3 486 aa17.45■□□□□ 0.38
HDDC3-203ENST00000494993 C18orf65Q6ZTR6 163 aa17.45■□□□□ 0.38
HDDC3-203ENST00000494993 C8orf86Q6ZUL3 223 aa17.45■□□□□ 0.38
HDDC3-203ENST00000494993 SATL1Q86VE3 508 aa17.45■□□□□ 0.38
HDDC3-203ENST00000494993 Q8NFD4 153 aa17.45■□□□□ 0.38
HDDC3-203ENST00000494993 OR51A2Q8NGJ7 313 aa17.45■□□□□ 0.38
HDDC3-203ENST00000494993 OR10K1Q8NGX5 313 aa17.45■□□□□ 0.38
HDDC3-203ENST00000494993 ZFP57Q9NU63 452 aa17.45■□□□□ 0.38
HDDC3-203ENST00000494993 IGKV1D-33P01593 117 aa17.44■□□□□ 0.38
HDDC3-203ENST00000494993 IGKV1-33P01594 117 aa17.44■□□□□ 0.38
HDDC3-203ENST00000494993 SLC6A1P30531 599 aa17.44■□□□□ 0.38
HDDC3-203ENST00000494993 GBX2P52951 348 aaPredicted RBP17.44■□□□□ 0.38
HDDC3-203ENST00000494993 HNF4GQ14541 408 aa17.44■□□□□ 0.38
HDDC3-203ENST00000494993 RSU1Q15404 277 aa17.44■□□□□ 0.38
HDDC3-203ENST00000494993 SLC35E3Q7Z769 313 aa17.44■□□□□ 0.38
HDDC3-203ENST00000494993 OR10X1Q8NGY0 326 aa17.44■□□□□ 0.38
HDDC3-203ENST00000494993 MCRIP2Q9BUT9 160 aaKnown RBP17.44■□□□□ 0.38
HDDC3-203ENST00000494993 FAM192AQ9GZU8 254 aa17.44■□□□□ 0.38
HDDC3-203ENST00000494993 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.44■□□□□ 0.38
HDDC3-203ENST00000494993 LINC00527Q9UJ94 153 aa17.44■□□□□ 0.38
HDDC3-203ENST00000494993 TRAV39A0A0B4J263 110 aa17.43■□□□□ 0.38
HDDC3-203ENST00000494993 NUDT19A8MXV4 375 aa17.43■□□□□ 0.38
HDDC3-203ENST00000494993 IGHG2P01859 326 aa17.43■□□□□ 0.38
HDDC3-203ENST00000494993 MYCNOSP40205 109 aa17.43■□□□□ 0.38
HDDC3-203ENST00000494993 SLC35B1P78383 322 aa17.43■□□□□ 0.38
HDDC3-203ENST00000494993 RAB40BQ12829 278 aa17.43■□□□□ 0.38
HDDC3-203ENST00000494993 ASCL4Q6XD76 172 aa17.43■□□□□ 0.38
HDDC3-203ENST00000494993 CBR4Q8N4T8 237 aa17.43■□□□□ 0.38
HDDC3-203ENST00000494993 KLHL30-AS1Q8NEE0 82 aa17.43■□□□□ 0.38
HDDC3-203ENST00000494993 DPCDQ9BVM2 203 aaPredicted RBP17.43■□□□□ 0.38
HDDC3-203ENST00000494993 JAM3Q9BX67 310 aa17.43■□□□□ 0.38
HDDC3-203ENST00000494993 AMBNQ9NP70 447 aa17.43■□□□□ 0.38
HDDC3-203ENST00000494993 TAS2R4Q9NYW5 299 aa17.43■□□□□ 0.38
HDDC3-203ENST00000494993 A0A1W2PPE3 182 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 H3BNX3 289 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 HSD17B6O14756 317 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 MPZL2O60487 215 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 HTR3BO95264 441 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 SOX2P48431 317 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 CD69Q07108 199 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 ZNF816Q0VGE8 651 aaPredicted RBP17.42■□□□□ 0.38
HDDC3-203ENST00000494993 FOXRED2Q8IWF2 684 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 COMMD1Q8N668 190 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 SUMF2Q8NBJ7 301 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 RHOXF1Q8NHV9 184 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 RGP1Q92546 391 aaPredicted RBP17.42■□□□□ 0.38
HDDC3-203ENST00000494993 Q96MT0 163 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 P2RX4Q99571 388 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 B9D2Q9BPU9 175 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 FAM118AQ9NWS6 357 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 ZNF581Q9P0T4 197 aa17.42■□□□□ 0.38
HDDC3-203ENST00000494993 GTF2A1P52655 376 aaPredicted RBP17.41■□□□□ 0.38
HDDC3-203ENST00000494993 EBI3Q14213 229 aa17.41■□□□□ 0.38
HDDC3-203ENST00000494993 STPG2Q8N412 459 aa17.41■□□□□ 0.38
HDDC3-203ENST00000494993 OR52I1Q8NGK6 324 aa17.41■□□□□ 0.38
HDDC3-203ENST00000494993 IFT22Q9H7X7 185 aa17.41■□□□□ 0.38
HDDC3-203ENST00000494993 ST3GAL6Q9Y274 331 aa17.41■□□□□ 0.38
HDDC3-203ENST00000494993 IGHV1-3A0A0C4DH29 117 aa17.4■□□□□ 0.38
HDDC3-203ENST00000494993 CDRT1O95170 752 aa17.4■□□□□ 0.38
HDDC3-203ENST00000494993 GAPDHP04406 335 aaKnown RBP17.4■□□□□ 0.38
HDDC3-203ENST00000494993 NHLRC3Q5JS37 347 aa17.4■□□□□ 0.38
HDDC3-203ENST00000494993 ZFP1Q6P2D0 407 aa17.4■□□□□ 0.38
HDDC3-203ENST00000494993 MOB3BQ86TA1 216 aa17.4■□□□□ 0.38
HDDC3-203ENST00000494993 MRPS18AQ9NVS2 196 aaKnown RBP17.4■□□□□ 0.38
HDDC3-203ENST00000494993 IL36GQ9NZH8 169 aa17.4■□□□□ 0.38
HDDC3-203ENST00000494993 TENM3Q9P273 2699 aa17.39■□□□□ 0.37
HDDC3-203ENST00000494993 LINC01548A6NM66 108 aa17.39■□□□□ 0.37
HDDC3-203ENST00000494993 CCRL2O00421 344 aa17.39■□□□□ 0.37
HDDC3-203ENST00000494993 OR7C1O76099 320 aaPredicted RBP17.39■□□□□ 0.37
HDDC3-203ENST00000494993 CD2P06729 351 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms