RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 MSRB3Q8IXL7 192 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 OR4C3Q8NH37 302 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 ZNF519Q8TB69 540 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 ASB10Q8WXI3 467 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 RAB39BQ96DA2 213 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 SDF2Q99470 211 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 GPR35Q9HC97 309 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 TNFSF18Q9UNG2 199 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 WDR45Q9Y484 360 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 LIPGQ9Y5X9 500 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 NCKAP5O14513 1909 aa10.04□□□□□ -0.8
BRCA1-222ENST00000493919 COL12A1Q99715 3063 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 FLNCQ14315 2725 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 RNF222A6NCQ9 220 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 J3QKU1 62 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 CDRT1O95170 752 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 CDS2O95674 445 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 HOXB9P17482 250 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-222ENST00000493919 OR3A2P47893 321 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 GSK3BP49841 420 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 MVDP53602 400 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 DVL1P1P54792 670 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-222ENST00000493919 MTPNP58546 118 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 UBE2KP61086 200 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 ST3GAL4Q11206 333 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 ZP4Q12836 540 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 SYPL1Q16563 259 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 SMIM20Q8N5G0 67 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 OR4K17Q8NGC6 315 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 OR1N2Q8NGR9 330 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 KCNG3Q8TAE7 436 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 PIGTQ969N2 578 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 AK6Q9Y3D8 172 aaKnown RBP10.03□□□□□ -0.8
BRCA1-222ENST00000493919 RFNGQ9Y644 331 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 HELZ2Q9BYK8 2649 aaKnown RBP10.03□□□□□ -0.8
BRCA1-222ENST00000493919 TMEM235A6NFC5 223 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 E9PQ18 207 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 GNGT2O14610 69 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 FCMRO60667 390 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 MT-ND4P03905 459 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 TAS2R43P59537 309 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 SRSF1Q07955 248 aaKnown RBP eCLIP10.03□□□□□ -0.8
BRCA1-222ENST00000493919 RGNQ15493 299 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 TMEM183BQ1AE95 376 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 ELFN2Q5R3F8 820 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 APOOLQ6UXV4 268 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 DOLPP1Q86YN1 238 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 ZFP41Q8N8Y5 198 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 OR5A2Q8NGI9 324 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 TMEM106AQ96A25 262 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 C1GALT1C1Q96EU7 318 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 SEPHS2Q99611 448 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 LINC00470Q9BZP3 86 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 IKZF5Q9H5V7 419 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 ZDHHC11Q9H8X9 412 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 SLC7A10Q9NS82 523 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 BET1LQ9NYM9 111 aa10.03□□□□□ -0.8
BRCA1-222ENST00000493919 CNOT2Q9NZN8 540 aaKnown RBP10.03□□□□□ -0.8
BRCA1-222ENST00000493919 A0A087WWC5 75 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 TRBV5-3A0A0A0MS03 114 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 CENPVL1A0A0U1RR11 272 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 A0A1B0GTH9 108 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 CREBL2O60519 120 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-222ENST00000493919 CST1P01037 141 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 PTHP01270 115 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 PGA3P0DJD8 388 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 PPIBP23284 216 aaKnown RBP10.02□□□□□ -0.81
BRCA1-222ENST00000493919 SLC6A6P31641 620 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 CRYBB2P43320 205 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 GNMTQ14749 295 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 CD226Q15762 336 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 SSX1Q16384 188 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 SRSF7Q16629 238 aaKnown RBP eCLIP10.02□□□□□ -0.81
BRCA1-222ENST00000493919 ZSWIM7Q19AV6 140 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 TMEM41BQ5BJD5 291 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 SLC25A53Q5H9E4 307 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 STPG4Q8N801 248 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 OR52E4Q8NGH9 312 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 OR1P1Q8NH06 330 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 RNF138Q8WVD3 245 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 MAL2Q969L2 176 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 TBX5Q99593 518 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 PSMG3Q9BT73 122 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-222ENST00000493919 MAGIXQ9H6Y5 334 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 RCE1Q9Y256 329 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 MEMO1Q9Y316 297 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 ZNF407Q9C0G0 2248 aa10.02□□□□□ -0.81
BRCA1-222ENST00000493919 NAP1L6A6NFF2 107 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 WIPF3A6NGB9 483 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 IGHG4P01861 327 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 HPXP02790 462 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 NGFRP08138 427 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 CHRM4P08173 479 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 TRGC1P0CF51 173 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 SLC6A2P23975 617 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 SNCAP37840 140 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 ASCL1P50553 236 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 SLC35A1P78382 337 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 SRSF3P84103 164 aaKnown RBP10.01□□□□□ -0.81
BRCA1-222ENST00000493919 CEACAM21Q3KPI0 293 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms