RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 TPBGQ13641 420 aa18.28■□□□□ 0.52
SNIP1-203ENST00000493916 LY6EQ16553 131 aa18.28■□□□□ 0.52
SNIP1-203ENST00000493916 LIPKQ5VXJ0 399 aa18.28■□□□□ 0.52
SNIP1-203ENST00000493916 ZNF596Q8TC21 504 aa18.28■□□□□ 0.52
SNIP1-203ENST00000493916 CCDC90BQ9GZT6 254 aa18.28■□□□□ 0.52
SNIP1-203ENST00000493916 SPACA1Q9HBV2 294 aa18.28■□□□□ 0.52
SNIP1-203ENST00000493916 TCF7L1Q9HCS4 588 aa18.28■□□□□ 0.52
SNIP1-203ENST00000493916 CALYQ9NYX4 217 aa18.28■□□□□ 0.52
SNIP1-203ENST00000493916 BLOC1S6Q9UL45 172 aa18.28■□□□□ 0.52
SNIP1-203ENST00000493916 RNF114Q9Y508 228 aa18.28■□□□□ 0.52
SNIP1-203ENST00000493916 NBEAL1Q6ZS30 2694 aa18.28■□□□□ 0.52
SNIP1-203ENST00000493916 IGLV1-47P01700 117 aa18.27■□□□□ 0.52
SNIP1-203ENST00000493916 HTR1DP28221 377 aa18.27■□□□□ 0.52
SNIP1-203ENST00000493916 MLLT11Q13015 90 aaPredicted RBP18.27■□□□□ 0.52
SNIP1-203ENST00000493916 FAM189A2Q15884 450 aa18.27■□□□□ 0.52
SNIP1-203ENST00000493916 FAM27D1Q5T7N8 215 aa18.27■□□□□ 0.52
SNIP1-203ENST00000493916 SLC35E4Q6ICL7 350 aa18.27■□□□□ 0.52
SNIP1-203ENST00000493916 LRRTM1Q86UE6 522 aa18.27■□□□□ 0.52
SNIP1-203ENST00000493916 NDNFQ8TB73 568 aa18.27■□□□□ 0.52
SNIP1-203ENST00000493916 KIRREL1Q96J84 757 aa18.27■□□□□ 0.52
SNIP1-203ENST00000493916 ZNF286AQ9HBT8 521 aa18.27■□□□□ 0.52
SNIP1-203ENST00000493916 ABCB10Q9NRK6 738 aa18.27■□□□□ 0.52
SNIP1-203ENST00000493916 RCC2Q9P258 522 aaKnown RBP18.27■□□□□ 0.52
SNIP1-203ENST00000493916 GHRLQ9UBU3 117 aa18.27■□□□□ 0.52
SNIP1-203ENST00000493916 TCF19Q9Y242 345 aa18.27■□□□□ 0.52
SNIP1-203ENST00000493916 FAM90A10PA6NDY2 464 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 FAM90A18PA6NE21 464 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 FAM90A16PA6NEW6 464 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 FAM90A20PA6NIJ5 464 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 FAM90A7PA6NKC0 464 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 FAM90A22PA8MWA6 464 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 FAM90A12PA8MX19 464 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 FAM90A5PA8MXJ8 464 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 FAM90A23PA8MXZ1 464 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 IL1AP01583 271 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 UCHL1P09936 223 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 FAM90A15PP0C7V4 464 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 FAM90A13PP0C7W8 464 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 FAM90A14PP0C7W9 464 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 FAM90A24PP0C7X0 464 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 HSMCR30P0CW71 290 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 PROK1P58294 105 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 TRAM1Q15629 374 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 PLA1AQ53H76 456 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 CEACAM19Q7Z692 300 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 HILPDAQ9Y5L2 63 aa18.26■□□□□ 0.51
SNIP1-203ENST00000493916 TMEM30CPA0ZSE6 113 aa18.25■□□□□ 0.51
SNIP1-203ENST00000493916 NPIPB11E5RHQ5 1161 aa18.25■□□□□ 0.51
SNIP1-203ENST00000493916 CHST1O43916 411 aa18.25■□□□□ 0.51
SNIP1-203ENST00000493916 MGMTP16455 207 aa18.25■□□□□ 0.51
SNIP1-203ENST00000493916 CPEP16870 476 aa18.25■□□□□ 0.51
SNIP1-203ENST00000493916 PSMA1P25786 263 aaKnown RBP18.25■□□□□ 0.51
SNIP1-203ENST00000493916 TBCEQ15813 527 aaPredicted RBP18.25■□□□□ 0.51
SNIP1-203ENST00000493916 HSD17B12Q53GQ0 312 aa18.25■□□□□ 0.51
SNIP1-203ENST00000493916 PRR31Q5SQ13 230 aa18.25■□□□□ 0.51
SNIP1-203ENST00000493916 ATAD3CQ5T2N8 411 aa18.25■□□□□ 0.51
SNIP1-203ENST00000493916 MRGPRDQ8TDS7 321 aa18.25■□□□□ 0.51
SNIP1-203ENST00000493916 RANBP3Q9H6Z4 567 aaPredicted RBP18.25■□□□□ 0.51
SNIP1-203ENST00000493916 ZNF696Q9H7X3 374 aa18.25■□□□□ 0.51
SNIP1-203ENST00000493916 IDI2-AS1Q9NZ38 188 aa18.25■□□□□ 0.51
SNIP1-203ENST00000493916 DPM3Q9P2X0 92 aa18.25■□□□□ 0.51
SNIP1-203ENST00000493916 FAM172BPA6NC97 362 aa18.24■□□□□ 0.51
SNIP1-203ENST00000493916 A6NDX4 124 aa18.24■□□□□ 0.51
SNIP1-203ENST00000493916 UBBP0CG47 229 aa18.24■□□□□ 0.51
SNIP1-203ENST00000493916 SRMP19623 302 aa18.24■□□□□ 0.51
SNIP1-203ENST00000493916 HLA-DRB5Q30154 266 aa18.24■□□□□ 0.51
SNIP1-203ENST00000493916 GLT8D1Q68CQ7 371 aa18.24■□□□□ 0.51
SNIP1-203ENST00000493916 TMEM104Q8NE00 496 aa18.24■□□□□ 0.51
SNIP1-203ENST00000493916 OR10A7Q8NGE5 316 aa18.24■□□□□ 0.51
SNIP1-203ENST00000493916 OR4C13Q8NGP0 309 aa18.24■□□□□ 0.51
SNIP1-203ENST00000493916 CREB3L1Q96BA8 519 aa18.24■□□□□ 0.51
SNIP1-203ENST00000493916 Q96M66 194 aa18.24■□□□□ 0.51
SNIP1-203ENST00000493916 CITED1Q99966 193 aa18.24■□□□□ 0.51
SNIP1-203ENST00000493916 FBLN5Q9UBX5 448 aa18.24■□□□□ 0.51
SNIP1-203ENST00000493916 PITPNC1Q9UKF7 332 aa18.24■□□□□ 0.51
SNIP1-203ENST00000493916 PKD1L1Q8TDX9 2849 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 TOR1AO14656 332 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 CRTAPO75718 401 aaPredicted RBP18.23■□□□□ 0.51
SNIP1-203ENST00000493916 CD37P11049 281 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 NFYBP25208 207 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 MAP2K4P45985 399 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 RAB13P51153 203 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 PRRX1P54821 245 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 RPS25P62851 125 aaKnown RBP18.23■□□□□ 0.51
SNIP1-203ENST00000493916 C1orf100Q5SVJ3 147 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 ZNF497Q6ZNH5 498 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 TMEM91Q6ZNR0 172 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 TMEM203Q969S6 136 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 MGLLQ99685 303 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 SELENOIQ9C0D9 397 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 NPFFR1Q9GZQ6 430 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 CST11Q9H112 138 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 BANF2Q9H503 90 aa18.23■□□□□ 0.51
SNIP1-203ENST00000493916 LEUTXA8MZ59 168 aa18.22■□□□□ 0.51
SNIP1-203ENST00000493916 MCRIP1C9JLW8 97 aa18.22■□□□□ 0.51
SNIP1-203ENST00000493916 F2RL2O00254 374 aa18.22■□□□□ 0.51
SNIP1-203ENST00000493916 GZMHP20718 246 aa18.22■□□□□ 0.51
SNIP1-203ENST00000493916 GABRA5P31644 462 aa18.22■□□□□ 0.51
SNIP1-203ENST00000493916 SSTR5P35346 364 aa18.22■□□□□ 0.51
SNIP1-203ENST00000493916 CEACAM3P40198 252 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms