RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 HLA-DRB5Q30154 266 aa13.34□□□□□ -0.27
PDLIM2-217ENST00000491330 TCF23Q7RTU1 214 aa13.34□□□□□ -0.27
PDLIM2-217ENST00000491330 CENPVQ7Z7K6 275 aaPredicted RBP13.34□□□□□ -0.27
PDLIM2-217ENST00000491330 DYNAPQ8N1N2 210 aa13.34□□□□□ -0.27
PDLIM2-217ENST00000491330 NKAIN3Q8N8D7 197 aa13.34□□□□□ -0.27
PDLIM2-217ENST00000491330 OR4P4Q8NGL7 312 aa13.34□□□□□ -0.27
PDLIM2-217ENST00000491330 CFHR4Q92496 578 aa13.34□□□□□ -0.27
PDLIM2-217ENST00000491330 BLOC1S6Q9UL45 172 aa13.34□□□□□ -0.27
PDLIM2-217ENST00000491330 ERICH4A6NGS2 130 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 BUB1B-PAK6H3BSN5 160 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 TSPAN15O95858 294 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 OPN1MWP04001 364 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 LPLP06858 475 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 OPN1MW2P0DN77 364 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 OPN1MW3P0DN78 364 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 IGFBP3P17936 291 aaPredicted RBP13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 OR3A4PP47883 348 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 SLC35A2P78381 396 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 DOC2BQ14184 412 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 MPV17LQ2QL34 196 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 ATAD3CQ5T2N8 411 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 NDUFA11Q86Y39 141 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 NRG4Q8WWG1 115 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 TOMM40LQ969M1 308 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 MRPS24Q96EL2 167 aaKnown RBP13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 DPCDQ9BVM2 203 aaPredicted RBP13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 MMP28Q9H239 520 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 IFT22Q9H7X7 185 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 ZNF702PQ9H963 129 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 CALYQ9NYX4 217 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 IDI2-AS1Q9NZ38 188 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 KIF25Q9UIL4 384 aa13.33□□□□□ -0.28
PDLIM2-217ENST00000491330 A0A087X0M5 115 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 A0A1B0GX30 115 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 TMEM30CPA0ZSE6 113 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 FAM90A22PA8MWA6 464 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 MMP23AO75900 390 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 LALBAP00709 142 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 CELP19835 753 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 IL3RAP26951 378 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 MADCAM1Q13477 382 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 SPHARQ15513 63 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 TPTE2P1Q5T6R2 138 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 CCBE1Q6UXH8 406 aaPredicted RBP13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 OR10X1Q8NGY0 326 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 R3HDM4Q96D70 268 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 COQ2Q96H96 371 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 OR5M11Q96RB7 305 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 SLC25A33Q9BSK2 321 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 ISYNA1Q9NPH2 558 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 RAB26Q9ULW5 256 aa13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 SIRT4Q9Y6E7 314 aaPredicted RBP13.32□□□□□ -0.28
PDLIM2-217ENST00000491330 TRBV5-7A0A0A0MS05 114 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 MCRIP1C9JLW8 97 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 KCNAB3O43448 404 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 OR2F2O95006 317 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 IL1AP01583 271 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 IGLV1-47P01700 117 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 SERPINA2P20848 420 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 PSMA1P25786 263 aaKnown RBP13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 RAB7AP51149 207 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 RPS11P62280 158 aaKnown RBP eCLIP13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 TRAM1Q15629 374 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 NSUN5P1Q3KNT7 163 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 JAGN1Q8N5M9 183 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 SUMF2Q8NBJ7 301 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 OR4X2Q8NGF9 303 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 OR10K1Q8NGX5 313 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 PHYHIPQ92561 330 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 ZNF184Q99676 751 aaPredicted RBP13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 UQCC2Q9BRT2 126 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 DUSP21Q9H596 190 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 ZNF286AQ9HBT8 521 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 GHRLQ9UBU3 117 aa13.31□□□□□ -0.28
PDLIM2-217ENST00000491330 KIAA2026Q5HYC2 2103 aa13.3□□□□□ -0.28
PDLIM2-217ENST00000491330 FAM172BPA6NC97 362 aa13.3□□□□□ -0.28
PDLIM2-217ENST00000491330 PTGES3LE9PB15 166 aa13.3□□□□□ -0.28
PDLIM2-217ENST00000491330 CDRT1O95170 752 aa13.3□□□□□ -0.28
PDLIM2-217ENST00000491330 RBM11P57052 281 aaKnown RBP13.3□□□□□ -0.28
PDLIM2-217ENST00000491330 BLCAPP62952 87 aa13.3□□□□□ -0.28
PDLIM2-217ENST00000491330 HES1Q14469 280 aa13.3□□□□□ -0.28
PDLIM2-217ENST00000491330 PIGYQ3MUY2 71 aa13.3□□□□□ -0.28
PDLIM2-217ENST00000491330 SLC22A6Q4U2R8 563 aa13.3□□□□□ -0.28
PDLIM2-217ENST00000491330 RBM48Q5RL73 367 aaKnown RBP13.3□□□□□ -0.28
PDLIM2-217ENST00000491330 THNSL2Q86YJ6 484 aa13.3□□□□□ -0.28
PDLIM2-217ENST00000491330 MRGPRDQ8TDS7 321 aa13.3□□□□□ -0.28
PDLIM2-217ENST00000491330 KIRREL1Q96J84 757 aa13.3□□□□□ -0.28
PDLIM2-217ENST00000491330 RBM14Q96PK6 669 aaKnown RBP13.3□□□□□ -0.28
PDLIM2-217ENST00000491330 SERTAD4Q9NUC0 356 aa13.3□□□□□ -0.28
PDLIM2-217ENST00000491330 TRAV24A0A0B4J272 114 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 J3QR06 171 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 SPINT2O43291 252 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 RGS10O43665 173 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 MRPS14O60783 128 aaKnown RBP13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 HABP2Q14520 560 aaPredicted RBP13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 LTC4SQ16873 150 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 C17orf58Q2M2W7 97 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 TMEM30BQ3MIR4 351 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 C9orf152Q5JTZ5 239 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 TRAT1Q6PIZ9 186 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms