RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 C4orf3Q8WVX3 66 aa16.17■□□□□ 0.18
CLIP2-208ENST00000491075 RNF166Q96A37 237 aaPredicted RBP16.17■□□□□ 0.18
CLIP2-208ENST00000491075 EAF1Q96JC9 268 aaPredicted RBP16.17■□□□□ 0.18
CLIP2-208ENST00000491075 TCRBV3S1A0A5B6 114 aa16.16■□□□□ 0.18
CLIP2-208ENST00000491075 MPZL2O60487 215 aa16.16■□□□□ 0.18
CLIP2-208ENST00000491075 DBTP11182 482 aaKnown RBP16.16■□□□□ 0.18
CLIP2-208ENST00000491075 INSL3P51460 131 aa16.16■□□□□ 0.18
CLIP2-208ENST00000491075 LTC4SQ16873 150 aa16.16■□□□□ 0.18
CLIP2-208ENST00000491075 PAN3Q58A45 887 aaKnown RBP16.16■□□□□ 0.18
CLIP2-208ENST00000491075 BARHL1Q9BZE3 327 aa16.16■□□□□ 0.18
CLIP2-208ENST00000491075 ENOPH1Q9UHY7 261 aa16.16■□□□□ 0.18
CLIP2-208ENST00000491075 SORL1Q92673 2214 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 IGHV1-3A0A0C4DH29 117 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 LY86O95711 162 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 GAPDHP04406 335 aaKnown RBP16.15■□□□□ 0.18
CLIP2-208ENST00000491075 MTNR1BP49286 362 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 PAX5Q02548 391 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 ZNF85Q03923 595 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 TMED1Q13445 227 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 DOC2BQ14184 412 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 MOB3BQ86TA1 216 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 Q8N6K4 173 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 Q8N9W7 124 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 OR13C3Q8NGS6 347 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 OR2T10Q8NGZ9 312 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 UTP4Q969X6 686 aaKnown RBP16.15■□□□□ 0.18
CLIP2-208ENST00000491075 FRRS1LQ9P0K9 344 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 MYRFQ9Y2G1 1151 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 BIRC6Q9NR09 4857 aa16.15■□□□□ 0.18
CLIP2-208ENST00000491075 IGHG4P01861 327 aa16.14■□□□□ 0.17
CLIP2-208ENST00000491075 TMEM225BP0DP42 221 aa16.14■□□□□ 0.17
CLIP2-208ENST00000491075 LYL1P12980 280 aa16.14■□□□□ 0.17
CLIP2-208ENST00000491075 CFHR3Q02985 330 aa16.14■□□□□ 0.17
CLIP2-208ENST00000491075 FDX2Q6P4F2 183 aa16.14■□□□□ 0.17
CLIP2-208ENST00000491075 RFESDQ8TAC1 157 aa16.14■□□□□ 0.17
CLIP2-208ENST00000491075 MRGPRDQ8TDS7 321 aa16.14■□□□□ 0.17
CLIP2-208ENST00000491075 PALMDQ9NP74 551 aa16.14■□□□□ 0.17
CLIP2-208ENST00000491075 IGHV3-72A0A0B4J1Y9 119 aa16.13■□□□□ 0.17
CLIP2-208ENST00000491075 TRAV24A0A0B4J272 114 aa16.13■□□□□ 0.17
CLIP2-208ENST00000491075 LCE6AA0A183 80 aa16.13■□□□□ 0.17
CLIP2-208ENST00000491075 VDAC1P21796 283 aa16.13■□□□□ 0.17
CLIP2-208ENST00000491075 SSTR5P35346 364 aa16.13■□□□□ 0.17
CLIP2-208ENST00000491075 REG1BP48304 166 aa16.13■□□□□ 0.17
CLIP2-208ENST00000491075 KCNJ3P48549 501 aa16.13■□□□□ 0.17
CLIP2-208ENST00000491075 ZP1P60852 638 aa16.13■□□□□ 0.17
CLIP2-208ENST00000491075 RSBN1Q5VWQ0 802 aaPredicted RBP16.13■□□□□ 0.17
CLIP2-208ENST00000491075 KDM4DQ6B0I6 523 aa16.13■□□□□ 0.17
CLIP2-208ENST00000491075 KCTD20Q7Z5Y7 419 aa16.13■□□□□ 0.17
CLIP2-208ENST00000491075 SBSPONQ8IVN8 264 aa16.13■□□□□ 0.17
CLIP2-208ENST00000491075 OR51A4Q8NGJ6 313 aa16.13■□□□□ 0.17
CLIP2-208ENST00000491075 CNIH3Q8TBE1 160 aa16.13■□□□□ 0.17
CLIP2-208ENST00000491075 RFKQ969G6 155 aa16.13■□□□□ 0.17
CLIP2-208ENST00000491075 ZCCHC4Q9H5U6 513 aa16.13■□□□□ 0.17
CLIP2-208ENST00000491075 LYSTQ99698 3801 aa16.12■□□□□ 0.17
CLIP2-208ENST00000491075 A0A1W2PPE3 182 aa16.12■□□□□ 0.17
CLIP2-208ENST00000491075 G3V2T6 193 aa16.12■□□□□ 0.17
CLIP2-208ENST00000491075 HCKP08631 526 aa16.12■□□□□ 0.17
CLIP2-208ENST00000491075 CCR9P51686 369 aa16.12■□□□□ 0.17
CLIP2-208ENST00000491075 GYS2P54840 703 aa16.12■□□□□ 0.17
CLIP2-208ENST00000491075 NANOS3P60323 173 aaKnown RBP16.12■□□□□ 0.17
CLIP2-208ENST00000491075 KISS1Q15726 138 aa16.12■□□□□ 0.17
CLIP2-208ENST00000491075 ELP2Q6IA86 826 aa16.12■□□□□ 0.17
CLIP2-208ENST00000491075 OR11H1Q8NG94 326 aa16.12■□□□□ 0.17
CLIP2-208ENST00000491075 OR8J1Q8NGP2 316 aa16.12■□□□□ 0.17
CLIP2-208ENST00000491075 OR10AC1Q8NH08 325 aa16.12■□□□□ 0.17
CLIP2-208ENST00000491075 NR1H4Q96RI1 486 aaPredicted RBP16.12■□□□□ 0.17
CLIP2-208ENST00000491075 RASL11BQ9BPW5 248 aa16.12■□□□□ 0.17
CLIP2-208ENST00000491075 ATP8B1O43520 1251 aa16.11■□□□□ 0.17
CLIP2-208ENST00000491075 HTR1AP08908 422 aa16.11■□□□□ 0.17
CLIP2-208ENST00000491075 OR8U8P0C7N1 319 aa16.11■□□□□ 0.17
CLIP2-208ENST00000491075 PSMB8P28062 276 aa16.11■□□□□ 0.17
CLIP2-208ENST00000491075 IL13RA2Q14627 380 aa16.11■□□□□ 0.17
CLIP2-208ENST00000491075 FAM27D1Q5T7N8 215 aa16.11■□□□□ 0.17
CLIP2-208ENST00000491075 TMEM104Q8NE00 496 aa16.11■□□□□ 0.17
CLIP2-208ENST00000491075 OR8H1Q8NGG4 311 aa16.11■□□□□ 0.17
CLIP2-208ENST00000491075 PLPPR1Q8TBJ4 325 aa16.11■□□□□ 0.17
CLIP2-208ENST00000491075 EME1Q96AY2 570 aa16.11■□□□□ 0.17
CLIP2-208ENST00000491075 S1PR3Q99500 378 aa16.11■□□□□ 0.17
CLIP2-208ENST00000491075 PLSCR3Q9NRY6 295 aa16.11■□□□□ 0.17
CLIP2-208ENST00000491075 FAM118AQ9NWS6 357 aa16.11■□□□□ 0.17
CLIP2-208ENST00000491075 ZNF580Q9UK33 172 aa16.11■□□□□ 0.17
CLIP2-208ENST00000491075 MOSP00540 346 aa16.1■□□□□ 0.17
CLIP2-208ENST00000491075 OR5H8P0DN80 308 aa16.1■□□□□ 0.17
CLIP2-208ENST00000491075 CD1BP29016 333 aa16.1■□□□□ 0.17
CLIP2-208ENST00000491075 MYOZ3Q8TDC0 251 aa16.1■□□□□ 0.17
CLIP2-208ENST00000491075 RTN4IP1Q8WWV3 396 aaPredicted RBP16.1■□□□□ 0.17
CLIP2-208ENST00000491075 CPNE2Q96FN4 548 aaPredicted RBP16.1■□□□□ 0.17
CLIP2-208ENST00000491075 HSPB9Q9BQS6 159 aa16.1■□□□□ 0.17
CLIP2-208ENST00000491075 GABARAPL1Q9H0R8 117 aa16.1■□□□□ 0.17
CLIP2-208ENST00000491075 POMPQ9Y244 141 aa16.1■□□□□ 0.17
CLIP2-208ENST00000491075 DNAH1Q9P2D7 4330 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 SLC16A6O15403 523 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 SULT1B1O43704 296 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 IGF1P05019 195 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 IL3RAP26951 378 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 SOX6P35712 828 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 ZNF691Q5VV52 312 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 ZNF429Q86V71 674 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 ZDHHC13Q8IUH4 622 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 FAM71E2Q8N5Q1 922 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms