RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	EAF1	Q96JC9	268 aa	Predicted RBP	11.93	□□□□□ -0.5
AGAP3-222	ENST00000490839	SPACA5	Q96QH8	159 aa		11.93	□□□□□ -0.5
AGAP3-222	ENST00000490839	IGHV1-3	A0A0C4DH29	117 aa		11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	HSPB6	O14558	160 aa		11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	IGHG4	P01861	327 aa		11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	GAPDH	P04406	335 aa	Known RBP	11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	ISG15	P05161	165 aa		11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	EPHA2	P29317	976 aa		11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	PAX5	Q02548	391 aa		11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	CFHR3	Q02985	330 aa		11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	LTC4S	Q16873	150 aa		11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	PAN3	Q58A45	887 aa	Known RBP	11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	MOB3B	Q86TA1	216 aa		11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	SPATA24	Q86W54	205 aa		11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839		Q8N9W7	124 aa		11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	OR13C9	Q8NGT0	318 aa		11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	OR2G2	Q8NGZ5	317 aa		11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	OR2T10	Q8NGZ9	312 aa		11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	BARHL1	Q9BZE3	327 aa		11.92	□□□□□ -0.5
AGAP3-222	ENST00000490839	STARD9	Q9P2P6	4700 aa		11.91	□□□□□ -0.5
AGAP3-222	ENST00000490839		H0YJX3	145 aa		11.91	□□□□□ -0.5
AGAP3-222	ENST00000490839	MITF	O75030	526 aa	Predicted RBP	11.91	□□□□□ -0.5
AGAP3-222	ENST00000490839	DBT	P11182	482 aa	Known RBP	11.91	□□□□□ -0.5
AGAP3-222	ENST00000490839	VDAC1	P21796	283 aa		11.91	□□□□□ -0.5
AGAP3-222	ENST00000490839	MTNR1B	P49286	362 aa		11.91	□□□□□ -0.5
AGAP3-222	ENST00000490839	TP53I3	Q53FA7	332 aa		11.91	□□□□□ -0.5
AGAP3-222	ENST00000490839	FAM27D1	Q5T7N8	215 aa		11.91	□□□□□ -0.5
AGAP3-222	ENST00000490839	OR11H1	Q8NG94	326 aa		11.91	□□□□□ -0.5
AGAP3-222	ENST00000490839	RFESD	Q8TAC1	157 aa		11.91	□□□□□ -0.5
AGAP3-222	ENST00000490839	MRGPRD	Q8TDS7	321 aa		11.91	□□□□□ -0.5
AGAP3-222	ENST00000490839	THTPA	Q9BU02	230 aa		11.91	□□□□□ -0.5
AGAP3-222	ENST00000490839	MYRF	Q9Y2G1	1151 aa		11.91	□□□□□ -0.5
AGAP3-222	ENST00000490839	IGHV3-72	A0A0B4J1Y9	119 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	TRAV24	A0A0B4J272	114 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	TCRBV3S1	A0A5B6	114 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	OR8U8	P0C7N1	319 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	TMEM225B	P0DP42	221 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	PSMB8	P28062	276 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	SSTR5	P35346	364 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	ATP6V1E1	P36543	226 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	REG1B	P48304	166 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	KCNJ3	P48549	501 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	ZP1	P60852	638 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	GNGT1	P63211	74 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	ZNF85	Q03923	595 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	TMED1	Q13445	227 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	FLOT2	Q14254	428 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	FDX2	Q6P4F2	183 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	OR8H1	Q8NGG4	311 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	OR13C3	Q8NGS6	347 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	CNIH3	Q8TBE1	160 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	MYOZ3	Q8TDC0	251 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	UTP4	Q969X6	686 aa	Known RBP	11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	RASL11B	Q9BPW5	248 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	ZMAT4	Q9H898	229 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	FRRS1L	Q9P0K9	344 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	ENOPH1	Q9UHY7	261 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	ZNF580	Q9UK33	172 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839	CSMD3	Q7Z407	3707 aa		11.9	□□□□□ -0.5
AGAP3-222	ENST00000490839		A0A1W2PPE3	182 aa		11.89	□□□□□ -0.51
AGAP3-222	ENST00000490839	OR5H8	P0DN80	308 aa		11.89	□□□□□ -0.51
AGAP3-222	ENST00000490839	T-ENOL	P0DO92	83 aa		11.89	□□□□□ -0.51
AGAP3-222	ENST00000490839	ELP2	Q6IA86	826 aa		11.89	□□□□□ -0.51
AGAP3-222	ENST00000490839	OR10AC1	Q8NH08	325 aa		11.89	□□□□□ -0.51
AGAP3-222	ENST00000490839	CITED4	Q96RK1	184 aa		11.89	□□□□□ -0.51
AGAP3-222	ENST00000490839	S1PR3	Q99500	378 aa		11.89	□□□□□ -0.51
AGAP3-222	ENST00000490839	HSPB9	Q9BQS6	159 aa		11.89	□□□□□ -0.51
AGAP3-222	ENST00000490839	ZCCHC4	Q9H5U6	513 aa		11.89	□□□□□ -0.51
AGAP3-222	ENST00000490839	ISYNA1	Q9NPH2	558 aa		11.89	□□□□□ -0.51
AGAP3-222	ENST00000490839	PLSCR3	Q9NRY6	295 aa		11.89	□□□□□ -0.51
AGAP3-222	ENST00000490839	GAR1	Q9NY12	217 aa	Known RBP	11.89	□□□□□ -0.51
AGAP3-222	ENST00000490839	MOS	P00540	346 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	IGF1	P05019	195 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	HCK	P08631	526 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	FRMD6-AS1	P0C7T7	363 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	CD1B	P29016	333 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	SOX6	P35712	828 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	CCR9	P51686	369 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	NANOS3	P60323	173 aa	Known RBP	11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	RUNX1	Q01196	453 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	IL13RA2	Q14627	380 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	KISS1	Q15726	138 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	KDM4D	Q6B0I6	523 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	OVCH2	Q7RTZ1	564 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	KCTD20	Q7Z5Y7	419 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	ZNF429	Q86V71	674 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	FAM71E2	Q8N5Q1	922 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	LINC00311	Q8N616	119 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	C8orf31	Q8N9H6	132 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	TMEM104	Q8NE00	496 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	OR51A4	Q8NGJ6	313 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	PLPPR1	Q8TBJ4	325 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	RFK	Q969G6	155 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	RNFT2	Q96EX2	444 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	UBE2E2	Q96LR5	201 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	KCTD7	Q96MP8	289 aa		11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	NR1H4	Q96RI1	486 aa	Predicted RBP	11.88	□□□□□ -0.51
AGAP3-222	ENST00000490839	SULT1B1	O43704	296 aa		11.87	□□□□□ -0.51
AGAP3-222	ENST00000490839	HTR1A	P08908	422 aa		11.87	□□□□□ -0.51

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