RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 SOCS1O15524 211 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 IGHV4-38-2P0DP08 117 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 SNRPBP14678 240 aaKnown RBP8.92□□□□□ -0.98
VPS13D-210ENST00000489961 EPHA1P21709 976 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 FPR2P25090 351 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 GLP1RP43220 463 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 DLX6P56179 175 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 BPIFB3P59826 476 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 GUCA2AQ02747 115 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 CTF1Q16619 201 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 KLF17Q5JT82 389 aaPredicted RBP8.92□□□□□ -0.98
VPS13D-210ENST00000489961 ZNF497Q6ZNH5 498 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 USP43Q70EL4 1123 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 C6orf201Q7Z4U5 140 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 LGALS14Q8TCE9 139 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 RAB2BQ8WUD1 216 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 BCL7BQ9BQE9 202 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 MS4A7Q9GZW8 240 aaPredicted RBP8.92□□□□□ -0.98
VPS13D-210ENST00000489961 ATG5Q9H1Y0 275 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 HEXA-AS1Q9H8Q6 139 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 ABRACLQ9P1F3 81 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 HSF4Q9ULV5 492 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 ETV7Q9Y603 341 aa8.92□□□□□ -0.98
VPS13D-210ENST00000489961 FN1P02751 2386 aaKnown RBP8.92□□□□□ -0.98
VPS13D-210ENST00000489961 IGHV3OR16-10A0A075B7F0 116 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 IGHV1-69DA0A0B4J2H0 117 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 CENPVL3A0A0U1RRI6 287 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 CLPXO76031 633 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 SCGNO76038 276 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 PAHP00439 452 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 IGHV1-69P01742 117 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 MT-ND4P03905 459 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 IGHV1-8P0DP01 117 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 HOXB4P17483 251 aaPredicted RBP8.91□□□□□ -0.98
VPS13D-210ENST00000489961 EFNB2P52799 333 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 TMBIM6P55061 237 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 PLA2G7Q13093 441 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 OR52W1Q6IF63 320 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 Q6ZTK2 550 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 C11orf42Q8N5U0 333 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 OR13A1Q8NGR1 328 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 MRGPRDQ8TDS7 321 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 SLC25A46Q96AG3 418 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 RAB3CQ96E17 227 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 SULT4A1Q9BR01 284 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 FAAP24Q9BTP7 215 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 DCSTAMPQ9H295 470 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 RAB9BQ9NP90 201 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 TRAPPC2LQ9UL33 140 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 SPATA2Q9UM82 520 aa8.91□□□□□ -0.98
VPS13D-210ENST00000489961 KIAA2026Q5HYC2 2103 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 MTORP42345 2549 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 KBTBD11-OT1A0A1B0GTJ5 212 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 FOXI3A8MTJ6 420 aaPredicted RBP8.9□□□□□ -0.98
VPS13D-210ENST00000489961 RNASEK-C17orf49H0YIS7 233 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 IFNA2P01563 188 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 GZMHP20718 246 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 RORCP51449 518 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 UBE2E1P51965 193 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 DLX1P56177 255 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 KLRD1Q13241 179 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 ARL6IP1Q15041 203 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 C6orf183Q5T699 404 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 TRAT1Q6PIZ9 186 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 HEPN1Q6WQI6 88 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 BRD3OSQ6XYD6 125 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 ZNF782Q6ZMW2 699 aaPredicted RBP8.9□□□□□ -0.98
VPS13D-210ENST00000489961 PDZD9Q8IXQ8 264 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 GAPTQ8N292 157 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 OR13D1Q8NGV5 346 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 OR10R2Q8NGX6 335 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 OR4K15Q8NH41 348 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 CCDC107Q8WV48 283 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 DYRK2Q92630 601 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 TNFRSF14Q92956 283 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 PHF21AQ96BD5 680 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 KCTD12Q96CX2 325 aaKnown RBP8.9□□□□□ -0.98
VPS13D-210ENST00000489961 ARHGAP5-AS1Q96IT6 56 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 PECRQ9BY49 303 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 RIMS4Q9H426 269 aaPredicted RBP8.9□□□□□ -0.98
VPS13D-210ENST00000489961 OCEL1Q9H607 264 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 CHMP1AQ9HD42 196 aaPredicted RBP8.9□□□□□ -0.98
VPS13D-210ENST00000489961 RHBDL2Q9NX52 303 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 CALYQ9NYX4 217 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 ZNF69Q9UC07 566 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 SESN1Q9Y6P5 492 aa8.9□□□□□ -0.98
VPS13D-210ENST00000489961 TRAV39A0A0B4J263 110 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 RAB27BO00194 218 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 ORC5O43913 435 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 CGB3P0DN86 165 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 CGB7P0DN87 165 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 COX7A1P24310 79 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 CDK2P24941 298 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 TMEM50BP56557 158 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 RIPPLY3P57055 190 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 MRPS15P82914 257 aaKnown RBP8.89□□□□□ -0.99
VPS13D-210ENST00000489961 PRB3Q04118 309 aaPredicted RBP8.89□□□□□ -0.99
VPS13D-210ENST00000489961 C17orf58Q2M2W7 97 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 PLAC9Q5JTB6 97 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 PRAMEF5Q5TYX0 476 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms