RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 OR8H3Q8N146 312 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 MRGPRDQ8TDS7 321 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 PYDC1Q8WXC3 89 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 PDCD1LG2Q9BQ51 273 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 BARHL1Q9BZE3 327 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 ISG20L2Q9H9L3 353 aaKnown RBP14.57□□□□□ -0.08
HDAC6-231ENST00000488905 AASSQ9UDR5 926 aa14.57□□□□□ -0.08
HDAC6-231ENST00000488905 NPIPB11E5RHQ5 1161 aa14.56□□□□□ -0.08
HDAC6-231ENST00000488905 GABRPO00591 440 aa14.56□□□□□ -0.08
HDAC6-231ENST00000488905 CCDC159P0C7I6 412 aa14.56□□□□□ -0.08
HDAC6-231ENST00000488905 SLC6A1P30531 599 aa14.56□□□□□ -0.08
HDAC6-231ENST00000488905 KCNJ3P48549 501 aa14.56□□□□□ -0.08
HDAC6-231ENST00000488905 ALDH3A2P51648 485 aa14.56□□□□□ -0.08
HDAC6-231ENST00000488905 PIGYQ3MUY2 71 aa14.56□□□□□ -0.08
HDAC6-231ENST00000488905 ZIK1Q3SY52 487 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-231ENST00000488905 C18orf65Q6ZTR6 163 aa14.56□□□□□ -0.08
HDAC6-231ENST00000488905 C8orf86Q6ZUL3 223 aa14.56□□□□□ -0.08
HDAC6-231ENST00000488905 OR5AK2Q8NH90 309 aa14.56□□□□□ -0.08
HDAC6-231ENST00000488905 PLPPR1Q8TBJ4 325 aa14.56□□□□□ -0.08
HDAC6-231ENST00000488905 HAVCR2Q8TDQ0 301 aa14.56□□□□□ -0.08
HDAC6-231ENST00000488905 TNFAIP8L1Q8WVP5 186 aa14.56□□□□□ -0.08
HDAC6-231ENST00000488905 MCRIP2Q9BUT9 160 aaKnown RBP14.56□□□□□ -0.08
HDAC6-231ENST00000488905 FAM192AQ9GZU8 254 aa14.56□□□□□ -0.08
HDAC6-231ENST00000488905 SERPINE3A8MV23 424 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 NUDT19A8MXV4 375 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 IGKV1D-33P01593 117 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 IGKV1-33P01594 117 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 GABRB1P18505 474 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 RAB3AP20336 220 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 CD69Q07108 199 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 MRPL28Q13084 256 aaKnown RBP14.55□□□□□ -0.08
HDAC6-231ENST00000488905 KLHL30-AS1Q8NEE0 82 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 OR10A7Q8NGE5 316 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 OR51A2Q8NGJ7 313 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 OR10X1Q8NGY0 326 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 RFESDQ8TAC1 157 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 GPER1Q99527 375 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 B9D2Q9BPU9 175 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 ZFP57Q9NU63 452 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 LINC00527Q9UJ94 153 aa14.55□□□□□ -0.08
HDAC6-231ENST00000488905 E9PI62 339 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 HSD17B6O14756 317 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 MAGEB3O15480 346 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 IGHG2P01859 326 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 SLC35B1P78383 322 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 HNF4GQ14541 408 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 RSU1Q15404 277 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 ZNF529Q6P280 563 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 SLC16A12Q6ZSM3 486 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 SLC35E3Q7Z769 313 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 SATL1Q86VE3 508 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 COMMD1Q8N668 190 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 Q8NFD4 153 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 OR10K1Q8NGX5 313 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 ERVK13-1Q9NX77 482 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 FAM53CQ9NYF3 392 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 GMPPBQ9Y5P6 360 aa14.54□□□□□ -0.08
HDAC6-231ENST00000488905 DYNC1I1O14576 645 aa14.53□□□□□ -0.08
HDAC6-231ENST00000488905 FADS2O95864 444 aaKnown RBP14.53□□□□□ -0.08
HDAC6-231ENST00000488905 MYCNOSP40205 109 aa14.53□□□□□ -0.08
HDAC6-231ENST00000488905 ZNF816Q0VGE8 651 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-231ENST00000488905 DCTN2Q13561 401 aaKnown RBP14.53□□□□□ -0.08
HDAC6-231ENST00000488905 FOXRED2Q8IWF2 684 aa14.53□□□□□ -0.08
HDAC6-231ENST00000488905 STPG2Q8N412 459 aa14.53□□□□□ -0.08
HDAC6-231ENST00000488905 RGP1Q92546 391 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-231ENST00000488905 P2RX4Q99571 388 aa14.53□□□□□ -0.08
HDAC6-231ENST00000488905 DPCDQ9BVM2 203 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-231ENST00000488905 TAS2R4Q9NYW5 299 aa14.53□□□□□ -0.08
HDAC6-231ENST00000488905 ZNF581Q9P0T4 197 aa14.53□□□□□ -0.08
HDAC6-231ENST00000488905 TRAV39A0A0B4J263 110 aa14.52□□□□□ -0.09
HDAC6-231ENST00000488905 A0A1W2PPE3 182 aa14.52□□□□□ -0.09
HDAC6-231ENST00000488905 GBX2P52951 348 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-231ENST00000488905 RAB40BQ12829 278 aa14.52□□□□□ -0.09
HDAC6-231ENST00000488905 IZUMO1Q8IYV9 350 aa14.52□□□□□ -0.09
HDAC6-231ENST00000488905 SUMF2Q8NBJ7 301 aa14.52□□□□□ -0.09
HDAC6-231ENST00000488905 JAM3Q9BX67 310 aa14.52□□□□□ -0.09
HDAC6-231ENST00000488905 AMBNQ9NP70 447 aa14.52□□□□□ -0.09
HDAC6-231ENST00000488905 FAM118AQ9NWS6 357 aa14.52□□□□□ -0.09
HDAC6-231ENST00000488905 IGHV1-3A0A0C4DH29 117 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 H0YHG0 523 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 H3BNX3 289 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 CCRL2O00421 344 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 MPZL2O60487 215 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 HTR3BO95264 441 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 REG1BP48304 166 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 SOX2P48431 317 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 RBM11P57052 281 aaKnown RBP14.51□□□□□ -0.09
HDAC6-231ENST00000488905 EBI3Q14213 229 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 NHLRC3Q5JS37 347 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 ASCL4Q6XD76 172 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 ZNF695Q8IW36 515 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 CBR4Q8N4T8 237 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 Q96MT0 163 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 IFT22Q9H7X7 185 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 ST3GAL6Q9Y274 331 aa14.51□□□□□ -0.09
HDAC6-231ENST00000488905 IGHV3-72A0A0B4J1Y9 119 aa14.5□□□□□ -0.09
HDAC6-231ENST00000488905 OR7C1O76099 320 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-231ENST00000488905 CD2P06729 351 aa14.5□□□□□ -0.09
HDAC6-231ENST00000488905 GTF2A1P52655 376 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-231ENST00000488905 MOB3BQ86TA1 216 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms