RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 TACSTD2P09758 323 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 IFI30P13284 250 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 TGFBR2P37173 567 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 COILP38432 576 aaPredicted RBP2.32□□□□□ -2.04
SSR1-209ENST00000488834 ETV6P41212 452 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 MAGEA3P43357 314 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 CAPZBP47756 277 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 TGM4P49221 684 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 SRP9P49458 86 aaKnown RBP2.32□□□□□ -2.04
SSR1-209ENST00000488834 RGS6P49758 472 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 CEBPGP53567 150 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 CXCR4P61073 352 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 STXBP1P61764 594 aaKnown RBP2.32□□□□□ -2.04
SSR1-209ENST00000488834 REEP5Q00765 189 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 TNFRSF9Q07011 255 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 TCP10Q12799 353 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 ECH1Q13011 328 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 PNOCQ13519 176 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 UBE2SQ16763 222 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 RNASE10Q5GAN6 216 aaKnown RBP2.32□□□□□ -2.04
SSR1-209ENST00000488834 C6orf52Q5T4I8 152 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 IDNKQ5T6J7 187 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 HACD4Q5VWC8 232 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 TEX261Q6UWH6 196 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 SPNS3Q6ZMD2 512 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 TMEM179Q6ZVK1 233 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 SSX7Q7RTT5 188 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 TMEM135Q86UB9 458 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 STK40Q8N2I9 435 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 STPG2Q8N412 459 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 LRRC18Q8N456 261 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 C9orf62Q8N4C0 152 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 TMEM156Q8N614 296 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 LRRC52Q8N7C0 313 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 GDPD1Q8N9F7 314 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 WDR31Q8NA23 367 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 ATP6V1C2Q8NEY4 427 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 OR10G2Q8NGC3 310 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 OR5D18Q8NGL1 313 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 OR9A2Q8NGT5 310 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 OR2Y1Q8NGV0 311 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 OR4K15Q8NH41 348 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 OR51A7Q8NH64 312 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 STOML3Q8TAV4 291 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 ACTL9Q8TC94 416 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 RNASEH2CQ8TDP1 164 aaKnown RBP2.32□□□□□ -2.04
SSR1-209ENST00000488834 C22orf15Q8WYQ4 148 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 RORBQ92753 470 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 EEF1AKMT3Q96AZ1 226 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 S100PBPQ96BU1 408 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 L3HYPDHQ96EM0 354 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 DYNLL2Q96FJ2 89 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 HYLS1Q96M11 299 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 LINC00052Q96N35 136 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 FOXC2Q99958 501 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 ZNF2Q9BSG1 426 aaPredicted RBP2.32□□□□□ -2.04
SSR1-209ENST00000488834 RSG1Q9BU20 258 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 GGACTQ9BVM4 153 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 UGT2B28Q9BY64 529 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 ING2Q9H160 280 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 PLEKHJ1Q9NW61 149 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 METTL1Q9UBP6 276 aaKnown RBP2.32□□□□□ -2.04
SSR1-209ENST00000488834 SHPKQ9UHJ6 478 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 SCP2D1Q9UJQ7 156 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 SSR3Q9UNL2 185 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 U3KQ87 197 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 ZSWIM8A7E2V4 1837 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 NFASCO94856 1347 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 USP42Q9H9J4 1324 aaKnown RBP2.32□□□□□ -2.04
SSR1-209ENST00000488834 CASKIN1Q8WXD9 1431 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 BCL9LQ86UU0 1499 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 TOPBP1Q92547 1522 aa2.32□□□□□ -2.04
SSR1-209ENST00000488834 USP32Q8NFA0 1604 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 CLTCQ00610 1675 aaKnown RBP2.31□□□□□ -2.04
SSR1-209ENST00000488834 DDX60Q8IY21 1712 aaKnown RBP2.31□□□□□ -2.04
SSR1-209ENST00000488834 KDM3BQ7LBC6 1761 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 DLG5Q8TDM6 1919 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 SCN9AQ15858 1988 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 SLC5A10A0PJK1 596 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 LRRN3E7EW58 273 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 K7EMT4 169 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 PLIN3O60664 434 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 MRPS14O60783 128 aaKnown RBP2.31□□□□□ -2.04
SSR1-209ENST00000488834 FOXH1O75593 365 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 TRAPPC6AO75865 159 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 VAMP5O95183 116 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 GADD45GO95257 159 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 UTS2O95399 124 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 CTDNEP1O95476 244 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 BGLAPP02818 100 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 METTL15P1P0C7V9 234 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 GIMD1P0DJR0 217 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 IGHV3-43DP0DP04 118 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 HLA-EP13747 358 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 IGFBP3P17936 291 aaPredicted RBP2.31□□□□□ -2.04
SSR1-209ENST00000488834 HSD11B1P28845 292 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 CYB561P49447 251 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 RAB7AP51149 207 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 RORCP51449 518 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 FGF8P55075 233 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms