RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 OLIG3Q7RTU3 272 aa1.39□□□□□ -2.19
CD46-215ENST00000488596 LYZL2Q7Z4W2 148 aa1.39□□□□□ -2.19
CD46-215ENST00000488596 LRRC6Q86X45 466 aa1.39□□□□□ -2.19
CD46-215ENST00000488596 TMEM239Q8WW34 195 aa1.39□□□□□ -2.19
CD46-215ENST00000488596 TMIGD2Q96BF3 282 aa1.39□□□□□ -2.19
CD46-215ENST00000488596 HIGD2AQ9BW72 106 aa1.39□□□□□ -2.19
CD46-215ENST00000488596 KCNIP2Q9NS61 270 aa1.39□□□□□ -2.19
CD46-215ENST00000488596 ENPP5Q9UJA9 477 aa1.39□□□□□ -2.19
CD46-215ENST00000488596 SNX24Q9Y343 169 aa1.39□□□□□ -2.19
CD46-215ENST00000488596 MMACHCQ9Y4U1 282 aa1.39□□□□□ -2.19
CD46-215ENST00000488596 FADS3Q9Y5Q0 445 aa1.39□□□□□ -2.19
CD46-215ENST00000488596 URGCP-MRPS24S4R325 110 aa1.39□□□□□ -2.19
CD46-215ENST00000488596 SHANK3Q9BYB0 1731 aa1.39□□□□□ -2.19
CD46-215ENST00000488596 CACNA1SQ13698 1873 aa1.39□□□□□ -2.19
CD46-215ENST00000488596 MYO16Q9Y6X6 1858 aa1.39□□□□□ -2.19
CD46-215ENST00000488596 CEP170Q5SW79 1584 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 DHX57Q6P158 1386 aaKnown RBP1.38□□□□□ -2.19
CD46-215ENST00000488596 TRBV24-1A0A075B6N3 115 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 TRAV8-2A0A0B4J237 113 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 A0A1W2PRG6 482 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 ARGFXA6NJG6 315 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 C8orf87E5RJ46 101 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 F8VP50 259 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 RNASEK-C17orf49H0YIS7 233 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 PLPP3O14495 311 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 LECT2O14960 151 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 SLC31A1O15431 190 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 EEF1E1O43324 174 aaKnown RBP1.38□□□□□ -2.19
CD46-215ENST00000488596 ZNF73O43830 326 aaPredicted RBP1.38□□□□□ -2.19
CD46-215ENST00000488596 APOA1P02647 267 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 GYPCP04921 128 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 PSMB9P28065 219 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 PYCR1P32322 319 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 OR10A3P58181 314 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 TPBGQ13641 420 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 APOFQ13790 326 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 PSG3Q16557 428 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 BSXQ3C1V8 233 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 ZCWPW2Q504Y3 356 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 NIPAL1Q6NVV3 410 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 SCXQ7RTU7 201 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 SLC25A45Q8N413 288 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 FER1L6-AS1Q8NA97 138 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 OR10D4PQ8NGN7 298 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 PDCD6IPQ8WUM4 868 aaKnown RBP1.38□□□□□ -2.19
CD46-215ENST00000488596 RAD51AP1Q96B01 352 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 OR8B2Q96RD0 313 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 B9D2Q9BPU9 175 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 ARL6Q9H0F7 186 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 GOLPH3Q9H4A6 298 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 SLC23A2Q9UGH3 650 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 PHLDA3Q9Y5J5 127 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 ABCB11O95342 1321 aa1.38□□□□□ -2.19
CD46-215ENST00000488596 TRPM3Q9HCF6 1732 aaPredicted RBP1.37□□□□□ -2.19
CD46-215ENST00000488596 GOLGA8IPA6NC78 632 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 POLR3GO15318 223 aaPredicted RBP1.37□□□□□ -2.19
CD46-215ENST00000488596 FGF16O43320 207 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 SGCEO43556 437 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 SH2D1AO60880 128 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 OPN1SWP03999 348 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 RAB2AP61019 212 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 CST6Q15828 149 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 OR10J3Q5JRS4 329 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 NOXRED1Q6NXP6 359 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 SSX7Q7RTT5 188 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 SPPL2BQ8TCT7 592 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 KCTD4Q8WVF5 259 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 CLDN23Q96B33 292 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 CCDC124Q96CT7 223 aaKnown RBP1.37□□□□□ -2.19
CD46-215ENST00000488596 CMBLQ96DG6 245 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 FAAP24Q9BTP7 215 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 EBPLQ9BY08 206 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 POTEKPQ9BYX7 375 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 ALX4Q9H161 411 aaPredicted RBP1.37□□□□□ -2.19
CD46-215ENST00000488596 MRPL16Q9NX20 251 aaKnown RBP1.37□□□□□ -2.19
CD46-215ENST00000488596 LINC00588Q9Y4M8 146 aa1.37□□□□□ -2.19
CD46-215ENST00000488596 YLPM1P49750 1951 aaKnown RBP1.37□□□□□ -2.19
CD46-215ENST00000488596 PLXNB1O43157 2135 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 TNFAIP8O95379 198 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 SNAP29O95721 258 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 GUSBP08236 651 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 PSKH1P11801 424 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 CBR1P16152 277 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 MAGEA6P43360 314 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 HSPA13P48723 471 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 HADHBP55084 474 aaKnown RBP1.36□□□□□ -2.19
CD46-215ENST00000488596 MP68P56378 58 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 OR2B6P58173 313 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 MMDQ15546 238 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 FBXO48Q5FWF7 155 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 C10orf91Q5T1B1 145 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 FAM162BQ5T6X4 162 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 TCF23Q7RTU1 214 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 TMEM25Q86YD3 366 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 KRTCAP2Q8N6L1 136 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 FAM45AQ8TCE6 357 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 HIST1H2BAQ96A08 127 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 MRAP2Q96G30 205 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 C20orf166-AS1Q96NR2 134 aa1.36□□□□□ -2.19
CD46-215ENST00000488596 SERPINB11Q96P15 392 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms