RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 SOX2P48431 317 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 SLC35A2P78381 396 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 RAB40BQ12829 278 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 MRPL28Q13084 256 aaKnown RBP9.67□□□□□ -0.86
VPS16-208ENST00000487461 IL13RA2Q14627 380 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 LTC4SQ16873 150 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 PIGYQ3MUY2 71 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 KHDC1LQ5JSQ8 128 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 ZNF329Q86UD4 541 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 OR56B4Q8NH76 319 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 MRGPRDQ8TDS7 321 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 TNFAIP8L1Q8WVP5 186 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 RGP1Q92546 391 aaPredicted RBP9.67□□□□□ -0.86
VPS16-208ENST00000487461 TOMM40LQ969M1 308 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 RCC1LQ96I51 464 aaKnown RBP9.67□□□□□ -0.86
VPS16-208ENST00000487461 GPER1Q99527 375 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 TAS2R4Q9NYW5 299 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 MOB4Q9Y3A3 225 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 AMMECR1Q9Y4X0 333 aaPredicted RBP9.67□□□□□ -0.86
VPS16-208ENST00000487461 HSPE1-MOB4S4R3N1 261 aa9.67□□□□□ -0.86
VPS16-208ENST00000487461 LOC100130705A0A1B0GUX0 176 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 A0A1W2PPI3 338 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 PSMB11A5LHX3 300 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 MAGEB3O15480 346 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 CDRT1O95170 752 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 HTR3BO95264 441 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 IL1AP01583 271 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 LIMS3P0CW19 117 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 LIMS4P0CW20 117 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 PAX5Q02548 391 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 HNF4GQ14541 408 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 RSU1Q15404 277 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 LINC00482Q8N8I6 264 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 SUMF2Q8NBJ7 301 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 HAVCR2Q8TDQ0 301 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 APH1BQ8WW43 257 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 NOL4LQ96MY1 436 aaPredicted RBP9.66□□□□□ -0.86
VPS16-208ENST00000487461 DPCDQ9BVM2 203 aaPredicted RBP9.66□□□□□ -0.86
VPS16-208ENST00000487461 JAM3Q9BX67 310 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 PCDHB16Q9NRJ7 776 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 FAM118AQ9NWS6 357 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 ING4Q9UNL4 249 aa9.66□□□□□ -0.86
VPS16-208ENST00000487461 RPL36Q9Y3U8 105 aaKnown RBP9.66□□□□□ -0.86
VPS16-208ENST00000487461 A0A1W2PPE3 182 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 WI2-2373I1.2A0A1W2PRP0 233 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 TMEM11P17152 192 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 SSTR5P35346 364 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 KCNJ3P48549 501 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 GNG10P50151 68 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 RAB7AP51149 207 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 MADCAM1Q13477 382 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 HES1Q14469 280 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 SMN1Q16637 294 aaKnown RBP9.65□□□□□ -0.86
VPS16-208ENST00000487461 KLHL22Q53GT1 634 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 XAF1Q6GPH4 301 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 ETV3LQ6ZN32 361 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 SLC16A12Q6ZSM3 486 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 C18orf65Q6ZTR6 163 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 MRPL41Q8IXM3 137 aaKnown RBP9.65□□□□□ -0.86
VPS16-208ENST00000487461 C5orf56Q8N8D9 126 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 OR10A7Q8NGE5 316 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 GPR148Q8TDV2 347 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 C9orf16Q9BUW7 83 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 FAM192AQ9GZU8 254 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 FGF20Q9NP95 211 aaPredicted RBP9.65□□□□□ -0.86
VPS16-208ENST00000487461 LINC00527Q9UJ94 153 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 ST3GAL6Q9Y274 331 aa9.65□□□□□ -0.86
VPS16-208ENST00000487461 SIRT4Q9Y6E7 314 aaPredicted RBP9.65□□□□□ -0.86
VPS16-208ENST00000487461 LINC01548A6NM66 108 aa9.64□□□□□ -0.87
VPS16-208ENST00000487461 WBP4O75554 376 aaKnown RBP9.64□□□□□ -0.87
VPS16-208ENST00000487461 DUS4LO95620 317 aaKnown RBP9.64□□□□□ -0.87
VPS16-208ENST00000487461 CLIC3O95833 236 aa9.64□□□□□ -0.87
VPS16-208ENST00000487461 IGKV1D-33P01593 117 aa9.64□□□□□ -0.87
VPS16-208ENST00000487461 IGKV1-33P01594 117 aa9.64□□□□□ -0.87
VPS16-208ENST00000487461 GZMHP20718 246 aa9.64□□□□□ -0.87
VPS16-208ENST00000487461 HOXD3P31249 432 aaPredicted RBP9.64□□□□□ -0.87
VPS16-208ENST00000487461 ETV1P50549 477 aa9.64□□□□□ -0.87
VPS16-208ENST00000487461 RPL23AP62750 156 aaKnown RBP9.64□□□□□ -0.87
VPS16-208ENST00000487461 EGFEM1PQ0D2K5 195 aa9.64□□□□□ -0.87
VPS16-208ENST00000487461 DEFB121Q5J5C9 76 aa9.64□□□□□ -0.87
VPS16-208ENST00000487461 FAM53AQ6NSI3 398 aaPredicted RBP9.64□□□□□ -0.87
VPS16-208ENST00000487461 RPL22L1Q6P5R6 122 aaKnown RBP9.64□□□□□ -0.87
VPS16-208ENST00000487461 OR8H3Q8N146 312 aa9.64□□□□□ -0.87
VPS16-208ENST00000487461 OR10X1Q8NGY0 326 aa9.64□□□□□ -0.87
VPS16-208ENST00000487461 CHPT1Q8WUD6 406 aa9.64□□□□□ -0.87
VPS16-208ENST00000487461 ORAI1Q96D31 301 aa9.64□□□□□ -0.87
VPS16-208ENST00000487461 CPNE2Q96FN4 548 aaPredicted RBP9.64□□□□□ -0.87
VPS16-208ENST00000487461 METTL9Q9H1A3 318 aa9.64□□□□□ -0.87
VPS16-208ENST00000487461 IFT22Q9H7X7 185 aa9.64□□□□□ -0.87
VPS16-208ENST00000487461 S100A14Q9HCY8 104 aa9.64□□□□□ -0.87
VPS16-208ENST00000487461 SERPINE3A8MV23 424 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 C15orf65H3BRN8 121 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 GEMIN2O14893 280 aaKnown RBP9.63□□□□□ -0.87
VPS16-208ENST00000487461 OGG1O15527 345 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 FGF16O43320 207 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 IGHG2P01859 326 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 REG1BP48304 166 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 THBS3P49746 956 aa9.63□□□□□ -0.87
VPS16-208ENST00000487461 RBM11P57052 281 aaKnown RBP9.63□□□□□ -0.87
VPS16-208ENST00000487461 ZNF816Q0VGE8 651 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms