RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 LECT2O14960 151 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 SH2D1AO60880 128 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 IVLP07476 585 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 CCDC172P0C7W6 258 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 PSKH1P11801 424 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 NUP62P37198 522 aaPredicted RBP1.5□□□□□ -2.17
LTN1-206ENST00000486427 COILP38432 576 aaPredicted RBP1.5□□□□□ -2.17
LTN1-206ENST00000486427 TSPAN5P62079 268 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 VSNL1P62760 191 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 TRAM1Q15629 374 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 C10orf91Q5T1B1 145 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 FAM183BPQ6ZVS7 135 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 RBM45Q8IUH3 476 aaKnown RBP1.5□□□□□ -2.17
LTN1-206ENST00000486427 FER1L6-AS1Q8NA97 138 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 ACBD4Q8NC06 268 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 OR5P2Q8WZ92 322 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 REEP6Q96HR9 211 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 PRRG3Q9BZD7 231 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 MAT2BQ9NZL9 334 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 CEP170Q5SW79 1584 aa1.5□□□□□ -2.17
LTN1-206ENST00000486427 RAB19A4D1S5 217 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 I3L4J1 428 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 PSMD11O00231 422 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 UBDO15205 165 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 CCL2P13500 99 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 EVI2BP34910 448 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 RPA3P35244 121 aaPredicted RBP1.49□□□□□ -2.17
LTN1-206ENST00000486427 MAGEA3P43357 314 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 RHOAP61586 193 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 CD164Q04900 197 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 PRDX1Q06830 199 aaKnown RBP1.49□□□□□ -2.17
LTN1-206ENST00000486427 TRIP13Q15645 432 aaPredicted RBP1.49□□□□□ -2.17
LTN1-206ENST00000486427 CST6Q15828 149 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 FAM162BQ5T6X4 162 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 SSX6Q7RTT6 188 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 KRTCAP2Q8N6L1 136 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 GATD1Q8NB37 220 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 LRRC20Q8TCA0 184 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 LMX1AQ8TE12 382 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 MSANTD3Q96H12 275 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 APOL4Q9BPW4 351 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 METTL8Q9H825 291 aaKnown RBP1.49□□□□□ -2.17
LTN1-206ENST00000486427 TUBA4BQ9H853 241 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 ZNF286AQ9HBT8 521 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 RPUSD1Q9UJJ7 312 aaKnown RBP1.49□□□□□ -2.17
LTN1-206ENST00000486427 POMPQ9Y244 141 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 BTRCQ9Y297 605 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 TBL2Q9Y4P3 447 aaKnown RBP1.49□□□□□ -2.17
LTN1-206ENST00000486427 MYO15BQ96JP2 1530 aa1.49□□□□□ -2.17
LTN1-206ENST00000486427 AK9Q5TCS8 1911 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 A0A1B0GW15 77 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 RNASEK-C17orf49H0YIS7 233 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 CST4P01036 141 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 ZNF3P17036 446 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 S100A2P29034 98 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 RAB25P57735 213 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 C1QTNF8P60827 252 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 PSG3Q16557 428 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 SCXQ7RTU7 201 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 NIT1Q86X76 327 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 C10orf107Q8IVU9 208 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 OR11G2Q8NGC1 345 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 OR8K1Q8NGG5 319 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 OR4A5Q8NH83 315 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 RNASE11Q8TAA1 199 aaKnown RBP1.48□□□□□ -2.17
LTN1-206ENST00000486427 KCTD4Q8WVF5 259 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 ZNF75CPQ92670 426 aaPredicted RBP1.48□□□□□ -2.17
LTN1-206ENST00000486427 CLDN23Q96B33 292 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 EBPLQ9BY08 206 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 ARL6Q9H0F7 186 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 ALX4Q9H161 411 aaPredicted RBP1.48□□□□□ -2.17
LTN1-206ENST00000486427 SLC23A2Q9UGH3 650 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 PHLDA3Q9Y5J5 127 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 SHANK3Q9BYB0 1731 aa1.48□□□□□ -2.17
LTN1-206ENST00000486427 IGHV3OR15-7A0A075B7D8 119 aa1.47□□□□□ -2.17
LTN1-206ENST00000486427 F8VP50 259 aa1.47□□□□□ -2.17
LTN1-206ENST00000486427 GYPCP04921 128 aa1.47□□□□□ -2.17
LTN1-206ENST00000486427 GUSBP08236 651 aa1.47□□□□□ -2.17
LTN1-206ENST00000486427 PSMB9P28065 219 aa1.47□□□□□ -2.17
LTN1-206ENST00000486427 TNNC1P63316 161 aa1.47□□□□□ -2.17
LTN1-206ENST00000486427 NOXRED1Q6NXP6 359 aa1.47□□□□□ -2.17
LTN1-206ENST00000486427 DGAT2L6Q6ZPD8 337 aa1.47□□□□□ -2.17
LTN1-206ENST00000486427 SSX7Q7RTT5 188 aa1.47□□□□□ -2.17
LTN1-206ENST00000486427 TCF23Q7RTU1 214 aa1.47□□□□□ -2.17
LTN1-206ENST00000486427 FAM19A3Q7Z5A8 133 aa1.47□□□□□ -2.17
LTN1-206ENST00000486427 PDCL2Q8N4E4 241 aa1.47□□□□□ -2.17
LTN1-206ENST00000486427 TMEM239Q8WW34 195 aa1.47□□□□□ -2.17
LTN1-206ENST00000486427 GOLPH3Q9H4A6 298 aa1.47□□□□□ -2.17
LTN1-206ENST00000486427 URGCP-MRPS24S4R325 110 aa1.47□□□□□ -2.17
LTN1-206ENST00000486427 A0A1W2PRG6 482 aa1.46□□□□□ -2.18
LTN1-206ENST00000486427 C8orf87E5RJ46 101 aa1.46□□□□□ -2.18
LTN1-206ENST00000486427 SPNP16150 400 aa1.46□□□□□ -2.18
LTN1-206ENST00000486427 LCN1P31025 176 aa1.46□□□□□ -2.18
LTN1-206ENST00000486427 PYCR1P32322 319 aa1.46□□□□□ -2.18
LTN1-206ENST00000486427 CBX5P45973 191 aa1.46□□□□□ -2.18
LTN1-206ENST00000486427 KCNJ3P48549 501 aa1.46□□□□□ -2.18
LTN1-206ENST00000486427 INPP1P49441 399 aa1.46□□□□□ -2.18
LTN1-206ENST00000486427 AQP5P55064 265 aa1.46□□□□□ -2.18
LTN1-206ENST00000486427 BSXQ3C1V8 233 aa1.46□□□□□ -2.18
LTN1-206ENST00000486427 OLIG3Q7RTU3 272 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms