RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 TRAV1-2A0A0B4J238 106 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 TMEM30CPA0ZSE6 113 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 ZNF729A6NN14 1252 aaPredicted RBP7.15□□□□□ -1.26
SNX4-205ENST00000482965 MCRIP1C9JLW8 97 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 H3BUI4 141 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 HOXA3O43365 443 aaPredicted RBP7.15□□□□□ -1.26
SNX4-205ENST00000482965 ARG1P05089 322 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 MELTFP08582 738 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 CD37P11049 281 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 ARSBP15848 533 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 CDK2P24941 298 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 ACTG1P63261 375 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 DYNC1I2Q13409 638 aaKnown RBP7.15□□□□□ -1.26
SNX4-205ENST00000482965 RBM39Q14498 530 aaKnown RBP7.15□□□□□ -1.26
SNX4-205ENST00000482965 SLC9A3R2Q15599 337 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 MIDNQ504T8 468 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 PRAMEF5Q5TYX0 476 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 RSBN1Q5VWQ0 802 aaPredicted RBP7.15□□□□□ -1.26
SNX4-205ENST00000482965 SLC35E4Q6ICL7 350 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 RAB12Q6IQ22 244 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 Q6YL49 198 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.15□□□□□ -1.26
SNX4-205ENST00000482965 OR13A1Q8NGR1 328 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 FAM216AQ8WUB2 273 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 SLC25A28Q96A46 364 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 NEDD4LQ96PU5 975 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 KCNK15Q9H427 330 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 NCOR1P1Q9H4R4 102 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 ZNF696Q9H7X3 374 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 TNFRSF19Q9NS68 423 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 TXNL4BQ9NX01 149 aaKnown RBP7.15□□□□□ -1.26
SNX4-205ENST00000482965 ETAA1Q9NY74 926 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 RCC2Q9P258 522 aaKnown RBP7.15□□□□□ -1.26
SNX4-205ENST00000482965 PEX16Q9Y5Y5 336 aa7.15□□□□□ -1.26
SNX4-205ENST00000482965 COL6A5A8TX70 2615 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 IGHV2-26A0A0B4J1V2 119 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 KBTBD11-OT1A0A1B0GTJ5 212 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 SHISA3A0PJX4 238 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 BTBD17A6NE02 478 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 TMEM14DPA8MWL7 114 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 CLDN34H7C241 214 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 CUBNO60494 3623 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 PDCD6O75340 191 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 MMP23AO75900 390 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 RNASE1P07998 156 aaKnown RBP7.14□□□□□ -1.27
SNX4-205ENST00000482965 CD36P16671 472 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 RAB3BP20337 219 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 FUT3P21217 361 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 OMGP23515 440 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 GADD45AP24522 165 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 FGF9P31371 208 aaPredicted RBP7.14□□□□□ -1.27
SNX4-205ENST00000482965 CLDN12P56749 244 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 OR10A3P58181 314 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 RPS27AP62979 156 aaKnown RBP7.14□□□□□ -1.27
SNX4-205ENST00000482965 QRFPP83859 136 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 PAX5Q02548 391 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 UNC119Q13432 240 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 C17orf58Q2M2W7 97 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 NKAPLQ5M9Q1 402 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 HES5Q5TA89 166 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 OR52W1Q6IF63 320 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 HEPN1Q6WQI6 88 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 OR2W3Q7Z3T1 314 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 LDLRAD3Q86YD5 345 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 TMEM86BQ8N661 226 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 ZNF565Q8N9K5 539 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 OR51D1Q8NGF3 324 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 MRGPRDQ8TDS7 321 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 CCDC107Q8WV48 283 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 SSMEM1Q8WWF3 244 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 FAM3DQ96BQ1 224 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 CHCHD6Q9BRQ6 235 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 URM1Q9BTM9 101 aaKnown RBP7.14□□□□□ -1.27
SNX4-205ENST00000482965 TM2D1Q9BX74 207 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 CLEC7AQ9BXN2 247 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 OR51E2Q9H255 320 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 TMEM133Q9H2Q1 129 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 DPAGT1Q9H3H5 408 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 CALYQ9NYX4 217 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 ZNRD1Q9P1U0 126 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 STEAP1Q9UHE8 339 aa7.14□□□□□ -1.27
SNX4-205ENST00000482965 TRAV39A0A0B4J263 110 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 LOC100506127A0A0U1RQW1 187 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 UBE2QL1A1L167 161 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 SMIM30A4D0T7 59 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 FAM172BPA6NC97 362 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 ODF3BA8MYP8 253 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 AIPO00170 330 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 LCE2BO14633 110 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 IL1AP01583 271 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 IGHV4-59P01825 116 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 MT-ND4P03905 459 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 GLAP06280 429 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 NFYBP25208 207 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 CHATP28329 748 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 GDNFP39905 211 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 LTC4SQ16873 150 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 ZNF626Q68DY1 528 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 SIGIRRQ6IA17 410 aa7.13□□□□□ -1.27
SNX4-205ENST00000482965 C16orf87Q6PH81 154 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms