RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 OR2W3Q7Z3T1 314 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 LDLRAD3Q86YD5 345 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 PNKDQ8N490 385 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 OR11H6Q8NGC7 330 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 PLPPR1Q8TBJ4 325 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 SSMEM1Q8WWF3 244 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 TMEM59Q9BXS4 323 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 ZNF581Q9P0T4 197 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 KIF25Q9UIL4 384 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 PEX16Q9Y5Y5 336 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 POMT1Q9Y6A1 747 aa13.53□□□□□ -0.24
HMGN1-214ENST00000482733 KBTBD11-OT1A0A1B0GTJ5 212 aa13.52□□□□□ -0.25
HMGN1-214ENST00000482733 TMEM14DPA8MWL7 114 aa13.52□□□□□ -0.25
HMGN1-214ENST00000482733 HOXA3O43365 443 aaPredicted RBP13.52□□□□□ -0.25
HMGN1-214ENST00000482733 CA11O75493 328 aa13.52□□□□□ -0.25
HMGN1-214ENST00000482733 RNASE1P07998 156 aaKnown RBP13.52□□□□□ -0.25
HMGN1-214ENST00000482733 MELTFP08582 738 aa13.52□□□□□ -0.25
HMGN1-214ENST00000482733 RAB3BP20337 219 aa13.52□□□□□ -0.25
HMGN1-214ENST00000482733 GLP1RP43220 463 aa13.52□□□□□ -0.25
HMGN1-214ENST00000482733 QRFPP83859 136 aa13.52□□□□□ -0.25
HMGN1-214ENST00000482733 URM1Q9BTM9 101 aaKnown RBP13.52□□□□□ -0.25
HMGN1-214ENST00000482733 C19orf24Q9BVV8 132 aa13.52□□□□□ -0.25
HMGN1-214ENST00000482733 TM2D1Q9BX74 207 aa13.52□□□□□ -0.25
HMGN1-214ENST00000482733 TMEM133Q9H2Q1 129 aa13.52□□□□□ -0.25
HMGN1-214ENST00000482733 DPAGT1Q9H3H5 408 aa13.52□□□□□ -0.25
HMGN1-214ENST00000482733 TXNL4BQ9NX01 149 aaKnown RBP13.52□□□□□ -0.25
HMGN1-214ENST00000482733 STEAP1Q9UHE8 339 aa13.52□□□□□ -0.25
HMGN1-214ENST00000482733 PDCD6O75340 191 aa13.51□□□□□ -0.25
HMGN1-214ENST00000482733 CD36P16671 472 aa13.51□□□□□ -0.25
HMGN1-214ENST00000482733 GZMHP20718 246 aa13.51□□□□□ -0.25
HMGN1-214ENST00000482733 CDK2P24941 298 aa13.51□□□□□ -0.25
HMGN1-214ENST00000482733 CFPP27918 469 aa13.51□□□□□ -0.25
HMGN1-214ENST00000482733 P2RY14Q15391 338 aa13.51□□□□□ -0.25
HMGN1-214ENST00000482733 OR10K2Q6IF99 312 aa13.51□□□□□ -0.25
HMGN1-214ENST00000482733 RTN4RL2Q86UN3 420 aa13.51□□□□□ -0.25
HMGN1-214ENST00000482733 TPRA1Q86W33 373 aa13.51□□□□□ -0.25
HMGN1-214ENST00000482733 OR13A1Q8NGR1 328 aa13.51□□□□□ -0.25
HMGN1-214ENST00000482733 FAM3DQ96BQ1 224 aa13.51□□□□□ -0.25
HMGN1-214ENST00000482733 NEDD4LQ96PU5 975 aa13.51□□□□□ -0.25
HMGN1-214ENST00000482733 LINC00574Q9H8X3 128 aa13.51□□□□□ -0.25
HMGN1-214ENST00000482733 ETAA1Q9NY74 926 aa13.51□□□□□ -0.25
HMGN1-214ENST00000482733 FBLN5Q9UBX5 448 aa13.51□□□□□ -0.25
HMGN1-214ENST00000482733 TBL2Q9Y4P3 447 aaKnown RBP13.51□□□□□ -0.25
HMGN1-214ENST00000482733 IGHV2-26A0A0B4J1V2 119 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 IFITM5A6NNB3 132 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 ODF3BA8MYP8 253 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 IL1AP01583 271 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 ARG1P05089 322 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 CGB3P0DN86 165 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 CGB7P0DN87 165 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 UNC119Q13432 240 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 C17orf58Q2M2W7 97 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 TIMM50Q3ZCQ8 353 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 PRAMEF5Q5TYX0 476 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 ZNF626Q68DY1 528 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 BRICD5Q6PL45 260 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 ZNF497Q6ZNH5 498 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-214ENST00000482733 BEND2Q8NDZ0 799 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 OR10A7Q8NGE5 316 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 MRGPRDQ8TDS7 321 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 KCTD7Q96MP8 289 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 DUX5Q96PT3 197 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 CLEC7AQ9BXN2 247 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 OR51E2Q9H255 320 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 RAB9BQ9NP90 201 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 CALYQ9NYX4 217 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 ZNRD1Q9P1U0 126 aa13.5□□□□□ -0.25
HMGN1-214ENST00000482733 SHISA3A0PJX4 238 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 BTBD17A6NE02 478 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 TRIM64CA6NLI5 447 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 AIPO00170 330 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 MMP23AO75900 390 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 MT-ND4P03905 459 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 JUNBP17275 347 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-214ENST00000482733 IER3P46695 156 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 DYNC1I2Q13409 638 aaKnown RBP13.49□□□□□ -0.25
HMGN1-214ENST00000482733 FAM189A2Q15884 450 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 AANATQ16613 207 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 C2orf76Q3KRA6 126 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 HES5Q5TA89 166 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 MINOS1Q5TGZ0 78 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 SIGIRRQ6IA17 410 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 C16orf87Q6PH81 154 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 GDPGP1Q6ZNW5 385 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 GAPTQ8N292 157 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 ABHD12Q8N2K0 398 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 OR51D1Q8NGF3 324 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 SPATA3Q8NHX4 192 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 ZNF596Q8TC21 504 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 MALSU1Q96EH3 234 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 MEGF9Q9H1U4 602 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 IDI2-AS1Q9NZ38 188 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 MINOS1-NBL1R4GNA1 71 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 COL6A5A8TX70 2615 aa13.49□□□□□ -0.25
HMGN1-214ENST00000482733 A0A087X0M5 115 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 A0A1B0GX30 115 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 NOTOA8MTQ0 251 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 NPIPB11E5RHQ5 1161 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 ORC5O43913 435 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms