RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 PRSS3P35030 304 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 P2RX3P56373 397 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 ZNF45Q02386 682 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 ZNF273Q14593 569 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 ZNF846Q147U1 533 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 PYDC2Q56P42 97 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 KRBOX4Q5JUW0 171 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 WDR25Q64LD2 544 aaPredicted RBP7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 SLC36A1Q7Z2H8 476 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 OR8B3Q8NGG8 313 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 OR13A1Q8NGR1 328 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 UBALD1Q8TB05 177 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 CCDC107Q8WV48 283 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 MED30Q96HR3 178 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 Q96MF0 132 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 OR8B2Q96RD0 313 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 CMSS1Q9BQ75 279 aaKnown RBP7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 WDR12Q9GZL7 423 aaKnown RBP7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 FAM234AQ9H0X4 552 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 KLK11Q9UBX7 282 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 MIOXQ9UGB7 285 aa7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 RBMX2Q9Y388 322 aaKnown RBP7.41□□□□□ -1.22
NUDCD3-208ENST00000480209 FLNAP21333 2647 aaKnown RBP7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 TRBV6-6A0A0A6YYG2 114 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 TMEM30CPA0ZSE6 113 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 ODAMA1E959 279 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 RNF223E7ERA6 249 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 GABARAPH6UMI1 98 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 TPPPO94811 219 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 LPLP06858 475 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 SLC25A16P16260 332 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 RCC1P18754 421 aaPredicted RBP7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 GLP1RP43220 463 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 EDDM3BP56851 147 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 DSCR9P59020 149 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 IFITM3Q01628 133 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 PAX2Q02962 417 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 ARFRP1Q13795 201 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 RBM39Q14498 530 aaKnown RBP7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 HERPUD1Q15011 391 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 LRRC10Q5BKY1 277 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 UTF1Q5T230 341 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 SLC35E4Q6ICL7 350 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 OR52W1Q6IF63 320 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 FAM53AQ6NSI3 398 aaPredicted RBP7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 BTN2A1Q7KYR7 527 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 GDPD3Q7L5L3 318 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 CIARTQ8N365 385 aaPredicted RBP7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 Q8N402 240 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 MAPK1IP1LQ8NDC0 245 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 MRGPRDQ8TDS7 321 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 S100ZQ8WXG8 99 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 H1FXQ92522 213 aaKnown RBP7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 DACT3Q96B18 629 aaPredicted RBP7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 FOXC2Q99958 501 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 OCSTAMPQ9BR26 566 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 SSBP3Q9BWW4 388 aaPredicted RBP7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 SCPEP1Q9HB40 452 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 Q9N2K0 584 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 MBNL3Q9NUK0 354 aaKnown RBP7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 MTFP1Q9UDX5 166 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 PCDHB10Q9UN67 800 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 EDARQ9UNE0 448 aa7.4□□□□□ -1.22
NUDCD3-208ENST00000480209 NOTCH2Q04721 2471 aa7.4□□□□□ -1.23
NUDCD3-208ENST00000480209 MEIKINA0A087WXM9 373 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 IGKV1-6A0A0C4DH72 117 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 A0A1W2PQ09 198 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 A8MXK9 166 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 C12orf77C9JDV5 145 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 C15orf65H3BRN8 121 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 SULT1C2O00338 296 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 ORC5O43913 435 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 IL7P13232 177 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 CCL3L1P16619 93 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 NAT1P18440 290 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 DTYMKP23919 212 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 ERP29P30040 261 aaKnown RBP7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 SSTR5P35346 364 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 GDNFP39905 211 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 KCNJ3P48549 501 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 PPP5CP53041 499 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 DLX6P56179 175 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 ERVFRD-1P60508 538 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 GNB2P62879 340 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 HLA-DRB3P79483 266 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 LCN2P80188 198 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 MRPS10P82664 201 aaKnown RBP7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 PITPNAQ00169 270 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 KLF9Q13886 244 aaPredicted RBP7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 ARL6IP1Q15041 203 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 HMGN3Q15651 99 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 C17orf58Q2M2W7 97 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 TMEM200BQ69YZ2 307 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 PRSS57Q6UWY2 283 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 NLRC3Q7RTR2 1065 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 HOGA1Q86XE5 327 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 GDPD1Q8N9F7 314 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 C8orf46Q8TAG6 207 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 SETD6Q8TBK2 473 aa7.39□□□□□ -1.23
NUDCD3-208ENST00000480209 LPAR2Q9HBW0 351 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms