RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 RPL22L1Q6P5R6 122 aaKnown RBP13.83□□□□□ -0.19
ECHDC1-216ENST00000479525 DRAM1Q8N682 238 aa13.83□□□□□ -0.19
ECHDC1-216ENST00000479525 MYDGFQ969H8 173 aa13.83□□□□□ -0.19
ECHDC1-216ENST00000479525 RPEQ96AT9 228 aa13.83□□□□□ -0.19
ECHDC1-216ENST00000479525 DPCDQ9BVM2 203 aaPredicted RBP13.83□□□□□ -0.19
ECHDC1-216ENST00000479525 LIN7BQ9HAP6 207 aa13.83□□□□□ -0.19
ECHDC1-216ENST00000479525 ST3GAL6Q9Y274 331 aa13.83□□□□□ -0.19
ECHDC1-216ENST00000479525 TRAV8-7A0A075B6U6 113 aa13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 IL1AP01583 271 aa13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 PF4V1P10720 104 aa13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 CD33P20138 364 aa13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 CEACAM3P40198 252 aa13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 IL13RA2Q14627 380 aa13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 ATAD3CQ5T2N8 411 aa13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 KPRPQ5T749 579 aaPredicted RBP13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 C18orf65Q6ZTR6 163 aa13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 C5orf24Q7Z6I8 188 aa13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 ZNF329Q86UD4 541 aa13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 OR4F17Q8NGA8 305 aa13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 OR9G1Q8NH87 305 aa13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 MRAPQ8TCY5 172 aa13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 NOL4LQ96MY1 436 aaPredicted RBP13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 OR4F4Q96R69 305 aa13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 RHOFQ9HBH0 211 aa13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 AURKAIP1Q9NWT8 199 aaPredicted RBP13.83□□□□□ -0.2
ECHDC1-216ENST00000479525 A0A087X0M5 115 aa13.82□□□□□ -0.2
ECHDC1-216ENST00000479525 A0A1B0GX30 115 aa13.82□□□□□ -0.2
ECHDC1-216ENST00000479525 A0A1W2PPI3 338 aa13.82□□□□□ -0.2
ECHDC1-216ENST00000479525 EBAG9O00559 213 aa13.82□□□□□ -0.2
ECHDC1-216ENST00000479525 ZNF93P35789 620 aaPredicted RBP13.82□□□□□ -0.2
ECHDC1-216ENST00000479525 RBM11P57052 281 aaKnown RBP13.82□□□□□ -0.2
ECHDC1-216ENST00000479525 MRPL28Q13084 256 aaKnown RBP13.82□□□□□ -0.2
ECHDC1-216ENST00000479525 SLC22A6Q4U2R8 563 aa13.82□□□□□ -0.2
ECHDC1-216ENST00000479525 OSR2Q8N2R0 312 aa13.82□□□□□ -0.2
ECHDC1-216ENST00000479525 DTX3Q8N9I9 347 aa13.82□□□□□ -0.2
ECHDC1-216ENST00000479525 NEK7Q8TDX7 302 aa13.82□□□□□ -0.2
ECHDC1-216ENST00000479525 MYCBPQ99417 103 aaPredicted RBP13.82□□□□□ -0.2
ECHDC1-216ENST00000479525 ZNF184Q99676 751 aaPredicted RBP13.82□□□□□ -0.2
ECHDC1-216ENST00000479525 BARHL1Q9BZE3 327 aa13.82□□□□□ -0.2
ECHDC1-216ENST00000479525 METTL9Q9H1A3 318 aa13.82□□□□□ -0.2
ECHDC1-216ENST00000479525 XPNPEP2O43895 674 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 ALDOBP05062 364 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 CD2P06729 351 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 C21orf33P30042 268 aaPredicted RBP13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 BDKRB2P30411 391 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 VHLP40337 213 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 MNDAP41218 407 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 PPP3R1P63098 170 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 FOXB2Q5VYV0 432 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 TMPRSS11AQ6ZMR5 421 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 C16orf82Q7Z2V1 217 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 ZNF565Q8N9K5 539 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 OR52N1Q8NH53 320 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 GHSRQ92847 366 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 SMIM19Q96E16 107 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 AKR1E2Q96JD6 320 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 ZNF281Q9Y2X9 895 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 MOB4Q9Y3A3 225 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 HSPE1-MOB4S4R3N1 261 aa13.81□□□□□ -0.2
ECHDC1-216ENST00000479525 OGG1O15527 345 aa13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 IGKV1D-33P01593 117 aa13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 IGKV1-33P01594 117 aa13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 PF4P02776 101 aa13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 CSTBP04080 98 aaKnown RBP13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 GNAO1P09471 354 aa13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 TMEM11P17152 192 aa13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 DCKP27707 260 aa13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 ARHGDIBP52566 201 aa13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 RPS11P62280 158 aaKnown RBP eCLIP13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 ASCL4Q6XD76 172 aa13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 GGHQ92820 318 aa13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 MUL1Q969V5 352 aa13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 OR14A2Q96R54 314 aa13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 TMEM138Q9NPI0 162 aa13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 BABAM2Q9NXR7 383 aa13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 DIMT1Q9UNQ2 313 aaKnown RBP13.8□□□□□ -0.2
ECHDC1-216ENST00000479525 LINC01548A6NM66 108 aa13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 NPIPB11E5RHQ5 1161 aa13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 PIN1P1O15428 100 aa13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 SLC31A2O15432 143 aa13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 MAS1P04201 325 aa13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 IGFBP3P17936 291 aaPredicted RBP13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 MYL12AP19105 171 aa13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 RIPK1Q13546 671 aa13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 CCDC58Q4VC31 144 aa13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 C10orf67Q8IYJ2 551 aa13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 OR10X1Q8NGY0 326 aa13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 ARL11Q969Q4 196 aa13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 CPNE2Q96FN4 548 aaPredicted RBP13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 PGLYRP3Q96LB9 341 aa13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 S100A13Q99584 98 aa13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 BANF2Q9H503 90 aa13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 EXOSC1Q9Y3B2 195 aaKnown RBP13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 AMMECR1Q9Y4X0 333 aaPredicted RBP13.79□□□□□ -0.2
ECHDC1-216ENST00000479525 TRBV5-5A0A0J9YX44 114 aa13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 ANKRD65E5RJM6 399 aa13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 H3BUI4 141 aa13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 MPIG6BO95866 241 aa13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 MADCAM1Q13477 382 aa13.78□□□□□ -0.2
ECHDC1-216ENST00000479525 RCN1Q15293 331 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms