RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 NEK7Q8TDX7 302 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 OCSTAMPQ9BR26 566 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 Q9N2K0 584 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 C12orf4Q9NQ89 552 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 MBNL3Q9NUK0 354 aaKnown RBP10.83□□□□□ -0.68
CHD3-210ENST00000479080 MTFP1Q9UDX5 166 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 MIOXQ9UGB7 285 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 ARID1AO14497 2285 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 ABCA2Q9BZC7 2435 aa10.83□□□□□ -0.68
CHD3-210ENST00000479080 PRRC2AP48634 2157 aaKnown RBP10.82□□□□□ -0.68
CHD3-210ENST00000479080 IGKV1-6A0A0C4DH72 117 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 TMEM30CPA0ZSE6 113 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 ODAMA1E959 279 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 A8MXK9 166 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 NDUFB3O43676 98 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 ORC5O43913 435 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 LPLP06858 475 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 SLC25A16P16260 332 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 ERP29P30040 261 aaKnown RBP10.82□□□□□ -0.68
CHD3-210ENST00000479080 GDNFP39905 211 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 ARFRP1Q13795 201 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 RBM39Q14498 530 aaKnown RBP10.82□□□□□ -0.68
CHD3-210ENST00000479080 HMGN3Q15651 99 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 UTF1Q5T230 341 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 OR52W1Q6IF63 320 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 FAM53AQ6NSI3 398 aaPredicted RBP10.82□□□□□ -0.68
CHD3-210ENST00000479080 PRSS57Q6UWY2 283 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 HOGA1Q86XE5 327 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 LYSMD2Q8IV50 215 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 Q8N402 240 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 GDPD1Q8N9F7 314 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 OR8B3Q8NGG8 313 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 UBALD1Q8TB05 177 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 CCDC107Q8WV48 283 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 Q96MF0 132 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 OR8B2Q96RD0 313 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 FOXC2Q99958 501 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 WDR12Q9GZL7 423 aaKnown RBP10.82□□□□□ -0.68
CHD3-210ENST00000479080 SCPEP1Q9HB40 452 aa10.82□□□□□ -0.68
CHD3-210ENST00000479080 ZNF469Q96JG9 3925 aaPredicted RBP10.81□□□□□ -0.68
CHD3-210ENST00000479080 C15orf65H3BRN8 121 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 SULT1C2O00338 296 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 IL7P13232 177 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 NDUFB7P17568 137 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 DTYMKP23919 212 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 DLX6P56179 175 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 EDDM3BP56851 147 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 MRPS10P82664 201 aaKnown RBP10.81□□□□□ -0.68
CHD3-210ENST00000479080 PITPNAQ00169 270 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 HERPUD1Q15011 391 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 ARL6IP1Q15041 203 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 C17orf58Q2M2W7 97 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 MAPK1IP1LQ8NDC0 245 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 LY6G5BQ8NDX9 201 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 PPP1R35Q8TAP8 253 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 NCOR1P1Q9H4R4 102 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 RABL2AQ9UBK7 228 aaPredicted RBP10.81□□□□□ -0.68
CHD3-210ENST00000479080 EDARQ9UNE0 448 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 RABL2BQ9UNT1 228 aa10.81□□□□□ -0.68
CHD3-210ENST00000479080 MEIKINA0A087WXM9 373 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 A0A1W2PQ09 198 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 C12orf77C9JDV5 145 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 RNF223E7ERA6 249 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 H3BUI4 141 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 CCL3L1P16619 93 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 SSTR5P35346 364 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 ERVFRD-1P60508 538 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 KLF9Q13886 244 aaPredicted RBP10.8□□□□□ -0.68
CHD3-210ENST00000479080 CR1LQ2VPA4 569 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 LRRC10Q5BKY1 277 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 TMEM200BQ69YZ2 307 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 Q6ZS49 121 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 BTN2A1Q7KYR7 527 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 GDPD3Q7L5L3 318 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 CIARTQ8N365 385 aaPredicted RBP10.8□□□□□ -0.68
CHD3-210ENST00000479080 C11orf42Q8N5U0 333 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 OR5D13Q8NGL4 314 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 C8orf46Q8TAG6 207 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 MRGPRDQ8TDS7 321 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 CORO2AQ92828 525 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 C1orf159Q96HA4 380 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 THAP7Q9BT49 309 aaPredicted RBP10.8□□□□□ -0.68
CHD3-210ENST00000479080 SSBP3Q9BWW4 388 aaPredicted RBP10.8□□□□□ -0.68
CHD3-210ENST00000479080 CLN8Q9UBY8 286 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 MYO9AB2RTY4 2548 aa10.8□□□□□ -0.68
CHD3-210ENST00000479080 ANK3Q12955 4377 aaKnown RBP10.79□□□□□ -0.68
CHD3-210ENST00000479080 ANKRD20A5PA0PJZ0 165 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 MMP23AO75900 390 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 SCTP09683 121 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 GSTT2P0CG29 244 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 GSTT2BP0CG30 244 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 USF1P22415 310 aaPredicted RBP10.79□□□□□ -0.68
CHD3-210ENST00000479080 RCVRNP35243 200 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 GLP1RP43220 463 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 HLA-DRB3P79483 266 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 NLRC3Q7RTR2 1065 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 OR4D10Q8NGI6 311 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 OR1L1Q8NH94 360 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 FCAMRQ8WWV6 532 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 H1FXQ92522 213 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms