RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 ZNF532Q9HCE3 1301 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 CD300LBA8K4G0 201 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 NPPAP01160 153 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 PRTN3P24158 256 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 STOMP27105 288 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 RAB25P57735 213 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 ACTR3P61158 418 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 DEFA6Q01524 100 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 EMX1Q04741 257 aaPredicted RBP-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 BNIP2Q12982 314 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 SRSF6Q13247 344 aaKnown RBP-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 SLC36A2Q495M3 483 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 GLYATQ6IB77 296 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 TWF2Q6IBS0 349 aaKnown RBP-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 EPGNQ6UW88 154 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 NANOGNBQ7Z5D8 188 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 Q8N2B8 174 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 LHFPL5Q8TAF8 219 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 NRGNQ92686 78 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 OLFM3Q96PB7 478 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 OR2M4Q96R27 311 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 C20orf144Q9BQM9 153 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 BCL2L14Q9BZR8 327 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 C20orf96Q9NUD7 363 aaPredicted RBP-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 WASHC3Q9Y3C0 194 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 KLF12Q9Y4X4 402 aa-0.54□□□□□ -2.5
NCKAP1-204ENST00000477988 PEAK1Q9H792 1746 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 POLR3AO14802 1390 aaPredicted RBP-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 PTPRJQ12913 1337 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 IGKV1-12A0A0C4DH73 117 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 OR2AT4A6NND4 320 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 C9J4A7 227 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 H3BP45 60 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 DFFAO00273 331 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 CXCL11O14625 94 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 OR2F2O95006 317 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 GCGP01275 180 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 IGKV1D-12P01611 117 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 AKR1C3P42330 323 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 IDI1Q13907 227 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 CDC37Q16543 378 aaPredicted RBP-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 C5orf64Q2M2E5 130 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 ACTBL2Q562R1 376 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 LCA10Q71F78 164 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 ZNF439Q8NDP4 499 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 PANX1Q96RD7 426 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 ZNF426Q9BUY5 554 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 POTEKPQ9BYX7 375 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 ALX4Q9H161 411 aaPredicted RBP-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 POMKQ9H5K3 350 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 C8orf4Q9NR00 106 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 MYEF2Q9P2K5 600 aaKnown RBP-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 SLC22A14Q9Y267 594 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 TNXBP22105 4242 aa-0.55□□□□□ -2.5
NCKAP1-204ENST00000477988 NINLQ9Y2I6 1382 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 REREQ9P2R6 1566 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 IGHV3-73A0A0B4J1V6 119 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 FAM240AA0A1B0GVK7 77 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 M0QXV9 152 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 GEMIN2O14893 280 aaKnown RBP-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 GNRH2O43555 120 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 SCN2BO60939 215 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 LY6HO94772 140 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 GFAPP14136 432 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 GABRA3P34903 492 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 ATP6V0D1P61421 351 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 MMDQ15546 238 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 Q499Y3 187 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 PDPK2PQ6A1A2 396 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 CASC1Q6TDU7 716 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 TRIML2Q8N7C3 387 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 AKR7LQ8NHP1 331 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 SPPL2BQ8TCT7 592 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 TSKUQ8WUA8 353 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 SMDT1Q9H4I9 107 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 WDR55Q9H6Y2 383 aaPredicted RBP-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 DDIT4Q9NX09 232 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 FLVCR2Q9UPI3 526 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 AP3M1Q9Y2T2 418 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 ADAMTSL3P82987 1691 aa-0.56□□□□□ -2.5
NCKAP1-204ENST00000477988 NSD2O96028 1365 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 KMT2CQ8NEZ4 4911 aaKnown RBP-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 STRCQ7RTU9 1775 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 TRAV41A0A0B4J266 112 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 F8W036 122 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 ALOX12BO75342 701 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 GPR1P46091 355 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 IDH3GP51553 393 aaPredicted RBP-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 CD164Q04900 197 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 LRRC75BQ2VPJ9 315 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 SSX7Q7RTT5 188 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 OLIG3Q7RTU3 272 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 DYNAPQ8N1N2 210 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 OR13C2Q8NGS9 318 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 OR10A6Q8NH74 314 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 NT5CQ8TCD5 201 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 CYGBQ8WWM9 190 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 TBC1D31Q96DN5 1066 aa-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 JSRP1Q96MG2 331 aaPredicted RBP-0.57□□□□□ -2.5
NCKAP1-204ENST00000477988 TSGA13Q96PP4 275 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms