RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 C17orf58Q2M2W7 97 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 C11orf91Q3C1V1 193 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 HCP5Q6MZN7 132 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 FAM53AQ6NSI3 398 aaPredicted RBP13.01□□□□□ -0.33
COPS3-207ENST00000477299 ZNF782Q6ZMW2 699 aaPredicted RBP13.01□□□□□ -0.33
COPS3-207ENST00000477299 ZNF497Q6ZNH5 498 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 USP43Q70EL4 1123 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 BCL6BQ8N143 479 aaPredicted RBP13.01□□□□□ -0.33
COPS3-207ENST00000477299 PNKDQ8N490 385 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 RAB2BQ8WUD1 216 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 NEDD4LQ96PU5 975 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 MRI1Q9BV20 369 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 ETAA1Q9NY74 926 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 AK3Q9UIJ7 227 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 CUBNO60494 3623 aa13.01□□□□□ -0.33
COPS3-207ENST00000477299 NAV3Q8IVL0 2385 aa13□□□□□ -0.33
COPS3-207ENST00000477299 hADV38S2A0JD32 116 aa13□□□□□ -0.33
COPS3-207ENST00000477299 DPPA5A6NC42 116 aa13□□□□□ -0.33
COPS3-207ENST00000477299 C17orf98A8MV24 154 aa13□□□□□ -0.33
COPS3-207ENST00000477299 ZNF728P0DKX0 622 aa13□□□□□ -0.33
COPS3-207ENST00000477299 GNB3P16520 340 aa13□□□□□ -0.33
COPS3-207ENST00000477299 OMGP23515 440 aa13□□□□□ -0.33
COPS3-207ENST00000477299 MEF2CQ06413 473 aaPredicted RBP13□□□□□ -0.33
COPS3-207ENST00000477299 METTL11BQ5VVY1 283 aa13□□□□□ -0.33
COPS3-207ENST00000477299 FOXB2Q5VYV0 432 aa13□□□□□ -0.33
COPS3-207ENST00000477299 RUSC1-AS1Q66K80 236 aa13□□□□□ -0.33
COPS3-207ENST00000477299 SLC35E4Q6ICL7 350 aa13□□□□□ -0.33
COPS3-207ENST00000477299 Q6ZTK2 550 aa13□□□□□ -0.33
COPS3-207ENST00000477299 TRAPPC6BQ86SZ2 158 aa13□□□□□ -0.33
COPS3-207ENST00000477299 CMTM4Q8IZR5 234 aa13□□□□□ -0.33
COPS3-207ENST00000477299 OR10R2Q8NGX6 335 aa13□□□□□ -0.33
COPS3-207ENST00000477299 RFESDQ8TAC1 157 aa13□□□□□ -0.33
COPS3-207ENST00000477299 MRGPRDQ8TDS7 321 aa13□□□□□ -0.33
COPS3-207ENST00000477299 C22orf15Q8WYQ4 148 aa13□□□□□ -0.33
COPS3-207ENST00000477299 TNFRSF14Q92956 283 aa13□□□□□ -0.33
COPS3-207ENST00000477299 LHX4Q969G2 390 aa13□□□□□ -0.33
COPS3-207ENST00000477299 UPRTQ96BW1 309 aa13□□□□□ -0.33
COPS3-207ENST00000477299 BEX2Q9BXY8 128 aa13□□□□□ -0.33
COPS3-207ENST00000477299 PLEKHJ1Q9NW61 149 aa13□□□□□ -0.33
COPS3-207ENST00000477299 TMEM160Q9NX00 188 aa13□□□□□ -0.33
COPS3-207ENST00000477299 RHBDL2Q9NX52 303 aa13□□□□□ -0.33
COPS3-207ENST00000477299 KPTNQ9Y664 436 aa13□□□□□ -0.33
COPS3-207ENST00000477299 LINC00312Q9Y6C7 94 aa13□□□□□ -0.33
COPS3-207ENST00000477299 MXRA5Q9NR99 2828 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 TRAV40A0A0B4J280 105 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 CENPVL3A0A0U1RRI6 287 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 FAM172BPA6NC97 362 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 CCDC160A6NGH7 325 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 RNASEK-C17orf49H0YIS7 233 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 HOXB4P17483 251 aaPredicted RBP12.99□□□□□ -0.33
COPS3-207ENST00000477299 RCC1P18754 421 aaPredicted RBP12.99□□□□□ -0.33
COPS3-207ENST00000477299 GLP1RP43220 463 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 MADCAM1Q13477 382 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 PRAMEF5Q5TYX0 476 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 BRD3OSQ6XYD6 125 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 IZUMO1Q8IYV9 350 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 GAPTQ8N292 157 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 OR56B1Q8NGI3 324 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 MRPL30Q8TCC3 161 aaKnown RBP12.99□□□□□ -0.33
COPS3-207ENST00000477299 DYNC2LI1Q8TCX1 351 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 CORO2AQ92828 525 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 PTX4Q96A99 478 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 ZNF714Q96N38 554 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 SPACA1Q9HBV2 294 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 ABRACLQ9P1F3 81 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 COMMD3Q9UBI1 195 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 SPATA2Q9UM82 520 aa12.99□□□□□ -0.33
COPS3-207ENST00000477299 TMEM30CPA0ZSE6 113 aa12.98□□□□□ -0.33
COPS3-207ENST00000477299 M0R1W7 72 aa12.98□□□□□ -0.33
COPS3-207ENST00000477299 CRLF1O75462 422 aa12.98□□□□□ -0.33
COPS3-207ENST00000477299 EIF4EP06730 217 aaKnown RBP12.98□□□□□ -0.33
COPS3-207ENST00000477299 PTHLHP12272 177 aa12.98□□□□□ -0.33
COPS3-207ENST00000477299 SSTR5P35346 364 aa12.98□□□□□ -0.33
COPS3-207ENST00000477299 KCNJ3P48549 501 aa12.98□□□□□ -0.33
COPS3-207ENST00000477299 RORCP51449 518 aa12.98□□□□□ -0.33
COPS3-207ENST00000477299 PAX5Q02548 391 aa12.98□□□□□ -0.33
COPS3-207ENST00000477299 RBM39Q14498 530 aaKnown RBP12.98□□□□□ -0.33
COPS3-207ENST00000477299 KIR3DL3Q8N743 410 aa12.98□□□□□ -0.33
COPS3-207ENST00000477299 SAMD12Q8N8I0 201 aa12.98□□□□□ -0.33
COPS3-207ENST00000477299 POM121Q96HA1 1249 aa12.98□□□□□ -0.33
COPS3-207ENST00000477299 ZNF69Q9UC07 566 aa12.98□□□□□ -0.33
COPS3-207ENST00000477299 HSF4Q9ULV5 492 aa12.98□□□□□ -0.33
COPS3-207ENST00000477299 UBE2J1Q9Y385 318 aaPredicted RBP12.98□□□□□ -0.33
COPS3-207ENST00000477299 NIPBLQ6KC79 2804 aaeCLIP12.98□□□□□ -0.33
COPS3-207ENST00000477299 TRGV10A0A0A0MS01 117 aa12.97□□□□□ -0.33
COPS3-207ENST00000477299 FUOMA2VDF0 154 aa12.97□□□□□ -0.33
COPS3-207ENST00000477299 MFNGO00587 321 aa12.97□□□□□ -0.33
COPS3-207ENST00000477299 HPGDSO60760 199 aa12.97□□□□□ -0.33
COPS3-207ENST00000477299 IGHV3-7P01780 117 aa12.97□□□□□ -0.33
COPS3-207ENST00000477299 GLAP06280 429 aa12.97□□□□□ -0.33
COPS3-207ENST00000477299 PRTN3P24158 256 aa12.97□□□□□ -0.33
COPS3-207ENST00000477299 COX7A1P24310 79 aa12.97□□□□□ -0.33
COPS3-207ENST00000477299 SRP14P37108 136 aaKnown RBP12.97□□□□□ -0.33
COPS3-207ENST00000477299 LTC4SQ16873 150 aa12.97□□□□□ -0.33
COPS3-207ENST00000477299 CDNFQ49AH0 187 aa12.97□□□□□ -0.33
COPS3-207ENST00000477299 C1orf122Q6ZSJ8 110 aa12.97□□□□□ -0.33
COPS3-207ENST00000477299 CROCCP3Q8IVE0 287 aa12.97□□□□□ -0.33
COPS3-207ENST00000477299 RAB3CQ96E17 227 aa12.97□□□□□ -0.33
COPS3-207ENST00000477299 DMRTB1Q96MA1 342 aa12.97□□□□□ -0.33
COPS3-207ENST00000477299 ETV7Q9Y603 341 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms