RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 MRPS28Q9Y2Q9 187 aaKnown RBP16.52■□□□□ 0.24
SNX13-206ENST00000474067 TRBV5-7A0A0A0MS05 114 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 FAM90A10PA6NDY2 464 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 FAM90A18PA6NE21 464 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 FAM90A16PA6NEW6 464 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 FAM90A20PA6NIJ5 464 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 FAM90A7PA6NKC0 464 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 FAM90A22PA8MWA6 464 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 FAM90A12PA8MX19 464 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 FAM90A5PA8MXJ8 464 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 FAM90A23PA8MXZ1 464 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 BUB1B-PAK6H3BSN5 160 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 CA11O75493 328 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 IGLV1-47P01700 117 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 FAM90A15PP0C7V4 464 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 FAM90A13PP0C7W8 464 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 FAM90A14PP0C7W9 464 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 FAM90A24PP0C7X0 464 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 NFYBP25208 207 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 GPR50Q13585 617 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 C6orf141Q5SZD1 244 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 ATAD3CQ5T2N8 411 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 RSBN1Q5VWQ0 802 aaPredicted RBP16.51■□□□□ 0.23
SNX13-206ENST00000474067 AWAT2Q6E213 333 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 ZFP41Q8N8Y5 198 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 SUMF2Q8NBJ7 301 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 OR13C5Q8NGS8 318 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 RPEQ96AT9 228 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 KIRREL1Q96J84 757 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 DERL3Q96Q80 235 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 CST11Q9H112 138 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 MMP28Q9H239 520 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 PPIL3Q9H2H8 161 aaKnown RBP16.51■□□□□ 0.23
SNX13-206ENST00000474067 LINC00574Q9H8X3 128 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 LIN7BQ9HAP6 207 aa16.51■□□□□ 0.23
SNX13-206ENST00000474067 PNMA8CA0A1B0GUJ8 204 aa16.5■□□□□ 0.23
SNX13-206ENST00000474067 MCRIP1C9JLW8 97 aa16.5■□□□□ 0.23
SNX13-206ENST00000474067 H0YHG0 523 aa16.5■□□□□ 0.23
SNX13-206ENST00000474067 MMP23AO75900 390 aa16.5■□□□□ 0.23
SNX13-206ENST00000474067 CSF1P09603 554 aa16.5■□□□□ 0.23
SNX13-206ENST00000474067 UBBP0CG47 229 aa16.5■□□□□ 0.23
SNX13-206ENST00000474067 RPS11P62280 158 aaKnown RBP eCLIP16.5■□□□□ 0.23
SNX13-206ENST00000474067 SPHARQ15513 63 aa16.5■□□□□ 0.23
SNX13-206ENST00000474067 C17orf58Q2M2W7 97 aa16.5■□□□□ 0.23
SNX13-206ENST00000474067 TRAT1Q6PIZ9 186 aa16.5■□□□□ 0.23
SNX13-206ENST00000474067 DYNAPQ8N1N2 210 aa16.5■□□□□ 0.23
SNX13-206ENST00000474067 Q8N2B8 174 aa16.5■□□□□ 0.23
SNX13-206ENST00000474067 KLHDC1Q8N7A1 406 aa16.5■□□□□ 0.23
SNX13-206ENST00000474067 PTGES3LE9PB15 166 aa16.49■□□□□ 0.23
SNX13-206ENST00000474067 GEMIN2O14893 280 aaKnown RBP16.49■□□□□ 0.23
SNX13-206ENST00000474067 CHST1O43916 411 aa16.49■□□□□ 0.23
SNX13-206ENST00000474067 MAS1P04201 325 aa16.49■□□□□ 0.23
SNX13-206ENST00000474067 GLAP06280 429 aa16.49■□□□□ 0.23
SNX13-206ENST00000474067 LPLP06858 475 aa16.49■□□□□ 0.23
SNX13-206ENST00000474067 FAM106CPP0CH98 169 aa16.49■□□□□ 0.23
SNX13-206ENST00000474067 RAB13P51153 203 aa16.49■□□□□ 0.23
SNX13-206ENST00000474067 SRSF4Q08170 494 aaKnown RBP16.49■□□□□ 0.23
SNX13-206ENST00000474067 MADCAM1Q13477 382 aa16.49■□□□□ 0.23
SNX13-206ENST00000474067 TRAM1Q15629 374 aa16.49■□□□□ 0.23
SNX13-206ENST00000474067 GLIPR1L1Q6UWM5 242 aa16.49■□□□□ 0.23
SNX13-206ENST00000474067 TOMM40LQ969M1 308 aa16.49■□□□□ 0.23
SNX13-206ENST00000474067 ZNF286AQ9HBT8 521 aa16.49■□□□□ 0.23
SNX13-206ENST00000474067 TRAV8-7A0A075B6U6 113 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 NPIPB11E5RHQ5 1161 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 ANKRD65E5RJM6 399 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 ORC5O43913 435 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 CGB3P0DN86 165 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 CGB7P0DN87 165 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 VSIG10L2P0DP72 767 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 PSMA1P25786 263 aaKnown RBP16.48■□□□□ 0.23
SNX13-206ENST00000474067 PAX6P26367 422 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 IL3RAP26951 378 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 RAB7AP51149 207 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 MED22Q15528 200 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 Q3ZCU0 254 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 TPTE2P1Q5T6R2 138 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 GLT8D1Q68CQ7 371 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 OR52M1Q8NGK5 317 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 OR13A1Q8NGR1 328 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 MRGPRDQ8TDS7 321 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 PHYHIPQ92561 330 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 MUL1Q969V5 352 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 BLOC1S6Q9UL45 172 aa16.48■□□□□ 0.23
SNX13-206ENST00000474067 J3QR06 171 aa16.47■□□□□ 0.23
SNX13-206ENST00000474067 AIPO00170 330 aa16.47■□□□□ 0.23
SNX13-206ENST00000474067 VDAC2P45880 294 aaPredicted RBP16.47■□□□□ 0.23
SNX13-206ENST00000474067 C6orf183Q5T699 404 aa16.47■□□□□ 0.23
SNX13-206ENST00000474067 LAIR2Q6ISS4 152 aa16.47■□□□□ 0.23
SNX13-206ENST00000474067 TMEM219Q86XT9 240 aa16.47■□□□□ 0.23
SNX13-206ENST00000474067 OR8H3Q8N146 312 aa16.47■□□□□ 0.23
SNX13-206ENST00000474067 OR10X1Q8NGY0 326 aa16.47■□□□□ 0.23
SNX13-206ENST00000474067 UFD1Q92890 307 aa16.47■□□□□ 0.23
SNX13-206ENST00000474067 ZNF702PQ9H963 129 aa16.47■□□□□ 0.23
SNX13-206ENST00000474067 ERICH4A6NGS2 130 aa16.46■□□□□ 0.23
SNX13-206ENST00000474067 SPINT2O43291 252 aa16.46■□□□□ 0.23
SNX13-206ENST00000474067 OR2F2O95006 317 aa16.46■□□□□ 0.23
SNX13-206ENST00000474067 AQP4P55087 323 aa16.46■□□□□ 0.23
SNX13-206ENST00000474067 KRTAP10-3P60369 221 aa16.46■□□□□ 0.23
SNX13-206ENST00000474067 EMX1Q04741 257 aaPredicted RBP16.46■□□□□ 0.23
SNX13-206ENST00000474067 ACSM3Q53FZ2 586 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms