RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 IGFBP7Q16270 282 aa18.12■□□□□ 0.49
COL18A1-207ENST00000473212 LOC400499M0QZD8 3231 aa18.11■□□□□ 0.49
COL18A1-207ENST00000473212 P04436 131 aa18.11■□□□□ 0.49
COL18A1-207ENST00000473212 CYC1P08574 325 aa18.11■□□□□ 0.49
COL18A1-207ENST00000473212 SRD5A2P31213 254 aa18.11■□□□□ 0.49
COL18A1-207ENST00000473212 FOLR3P41439 243 aa18.11■□□□□ 0.49
COL18A1-207ENST00000473212 ZNF343Q6P1L6 599 aa18.11■□□□□ 0.49
COL18A1-207ENST00000473212 ADGRG7Q96K78 797 aa18.11■□□□□ 0.49
COL18A1-207ENST00000473212 FAM86C1Q9NVL1 165 aa18.11■□□□□ 0.49
COL18A1-207ENST00000473212 KIAA1456Q9P272 454 aa18.11■□□□□ 0.49
COL18A1-207ENST00000473212 IGKV1D-13A0A0B4J2D9 117 aa18.11■□□□□ 0.49
COL18A1-207ENST00000473212 TK1P04183 234 aa18.11■□□□□ 0.49
COL18A1-207ENST00000473212 IGKV1-13P0DP09 117 aa18.11■□□□□ 0.49
COL18A1-207ENST00000473212 BCL3P20749 454 aa18.11■□□□□ 0.49
COL18A1-207ENST00000473212 UBE2KP61086 200 aa18.11■□□□□ 0.49
COL18A1-207ENST00000473212 SRYQ05066 204 aa18.11■□□□□ 0.49
COL18A1-207ENST00000473212 UNKLQ9H9P5 680 aaKnown RBP18.11■□□□□ 0.49
COL18A1-207ENST00000473212 TRBV23-1A0A0A0MS06 115 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 ZNF503-AS2A6NEH8 195 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 WDR5BQ86VZ2 330 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 CYB561D1Q8N8Q1 229 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 SIGLEC12Q96PQ1 595 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 URGCP-MRPS24S4R325 110 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 ATXN7O15265 892 aaPredicted RBP18.1■□□□□ 0.49
COL18A1-207ENST00000473212 IGHV2-70P01814 119 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 MMP7P09237 267 aaPredicted RBP18.1■□□□□ 0.49
COL18A1-207ENST00000473212 ZNF154Q13106 437 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 ICAM4Q14773 271 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 PPP1R32Q7Z5V6 425 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 ZNF429Q86V71 674 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 LURAP1LQ8IV03 231 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 OR8G5Q8NG78 346 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 OR56B2PQ8NGI1 322 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 Q9N2K0 584 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 GPR179Q6PRD1 2367 aa18.1■□□□□ 0.49
COL18A1-207ENST00000473212 BTBD17A6NE02 478 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 DNPH1O43598 174 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 SCAF4O95104 1147 aaKnown RBP18.09■□□□□ 0.49
COL18A1-207ENST00000473212 CELA3AP09093 270 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 DLK1P80370 383 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 IL22RA1Q8N6P7 574 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 OR2V1Q8NHB1 315 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 CPNE4Q96A23 557 aaPredicted RBP18.09■□□□□ 0.49
COL18A1-207ENST00000473212 SLC22A20A6NK97 555 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 ZNF732B4DXR9 585 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 NTN3O00634 580 aaPredicted RBP18.09■□□□□ 0.49
COL18A1-207ENST00000473212 TNFSF12O43508 249 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 CHST1O43916 411 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 CXCL1P09341 107 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 GDF1P27539 372 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 PCBD1P61457 104 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 ZFP36L1Q07352 338 aaKnown RBP18.09■□□□□ 0.49
COL18A1-207ENST00000473212 HERPUD1Q15011 391 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 NMSQ5H8A3 153 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 ABLIM2Q6H8Q1 611 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 SPINK14Q6IE38 97 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 PLPPR1Q8TBJ4 325 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 Q8WTZ3 238 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 HLA-CQ95604 372 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 GGACTQ9BVM4 153 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 CCL28Q9NRJ3 127 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 R4GN57 208 aa18.09■□□□□ 0.49
COL18A1-207ENST00000473212 DIDO1Q9BTC0 2240 aaKnown RBP18.08■□□□□ 0.49
COL18A1-207ENST00000473212 HLA-HP01893 362 aa18.08■□□□□ 0.49
COL18A1-207ENST00000473212 GPM6AP51674 278 aa18.08■□□□□ 0.49
COL18A1-207ENST00000473212 TRIM61Q5EBN2 209 aa18.08■□□□□ 0.49
COL18A1-207ENST00000473212 AKR1C8PQ5T2L2 129 aa18.08■□□□□ 0.49
COL18A1-207ENST00000473212 P4HA3Q7Z4N8 544 aa18.08■□□□□ 0.49
COL18A1-207ENST00000473212 BCL2L14Q9BZR8 327 aa18.08■□□□□ 0.49
COL18A1-207ENST00000473212 TOLLIPQ9H0E2 274 aa18.08■□□□□ 0.49
COL18A1-207ENST00000473212 HOXA5P20719 270 aa18.08■□□□□ 0.48
COL18A1-207ENST00000473212 NDUFA6P56556 154 aa18.08■□□□□ 0.48
COL18A1-207ENST00000473212 ID3Q02535 119 aa18.08■□□□□ 0.48
COL18A1-207ENST00000473212 ELOBQ15370 118 aa18.08■□□□□ 0.48
COL18A1-207ENST00000473212 ZNF674Q2M3X9 581 aa18.08■□□□□ 0.48
COL18A1-207ENST00000473212 SP5Q6BEB4 398 aaPredicted RBP18.08■□□□□ 0.48
COL18A1-207ENST00000473212 GNPNAT1Q96EK6 184 aaPredicted RBP18.08■□□□□ 0.48
COL18A1-207ENST00000473212 TECTBQ96PL2 329 aa18.08■□□□□ 0.48
COL18A1-207ENST00000473212 PRRG4Q9BZD6 226 aa18.08■□□□□ 0.48
COL18A1-207ENST00000473212 WSB1Q9Y6I7 421 aa18.08■□□□□ 0.48
COL18A1-207ENST00000473212 NBEAQ8NFP9 2946 aa18.08■□□□□ 0.48
COL18A1-207ENST00000473212 TNRC6BQ9UPQ9 1833 aaKnown RBP18.07■□□□□ 0.48
COL18A1-207ENST00000473212 RD3LP0DJH9 198 aa18.07■□□□□ 0.48
COL18A1-207ENST00000473212 VDAC1P21796 283 aa18.07■□□□□ 0.48
COL18A1-207ENST00000473212 HAAOP46952 286 aa18.07■□□□□ 0.48
COL18A1-207ENST00000473212 ESPL1Q14674 2120 aa18.07■□□□□ 0.48
COL18A1-207ENST00000473212 ZNF488Q96MN9 340 aa18.07■□□□□ 0.48
COL18A1-207ENST00000473212 HES7Q9BYE0 225 aa18.07■□□□□ 0.48
COL18A1-207ENST00000473212 TINAGQ9UJW2 476 aa18.07■□□□□ 0.48
COL18A1-207ENST00000473212 NCOR1O75376 2440 aa18.07■□□□□ 0.48
COL18A1-207ENST00000473212 IFITM10A6NMD0 228 aa18.07■□□□□ 0.48
COL18A1-207ENST00000473212 WRBO00258 174 aa18.07■□□□□ 0.48
COL18A1-207ENST00000473212 RAB2AP61019 212 aa18.07■□□□□ 0.48
COL18A1-207ENST00000473212 NEK7Q8TDX7 302 aa18.07■□□□□ 0.48
COL18A1-207ENST00000473212 SGCZQ96LD1 299 aa18.07■□□□□ 0.48
COL18A1-207ENST00000473212 C1QTNF5Q9BXJ0 243 aa18.07■□□□□ 0.48
COL18A1-207ENST00000473212 KNTC1P50748 2209 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 NAPSAO96009 420 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 UCP1P25874 307 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 ERVFRD-1P60508 538 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms