RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 BNIP1Q12981 228 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 EDDM3AQ14507 147 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 ZNF273Q14593 569 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 ZNF146Q15072 292 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 TWIST1Q15672 202 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 TMEM30BQ3MIR4 351 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 C9orf66Q5T8R8 295 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 TMEM42Q69YG0 159 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 CGB2Q6NT52 195 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 TEX38Q6PEX7 206 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 ZNF322Q6U7Q0 402 aaPredicted RBP2.78□□□□□ -1.96
XRN1-209ENST00000472625 HEPN1Q6WQI6 88 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 CCDC121Q6ZUS5 278 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 MOB3CQ70IA8 216 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 ASRGL1Q7L266 308 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 RNF144BQ7Z419 303 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 LHFPL4Q7Z7J7 247 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 ELMOD2Q8IZ81 293 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 OR8H3Q8N146 312 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 FGFRL1Q8N441 504 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 RNF148Q8N7C7 305 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 ZNF565Q8N9K5 539 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 DNAAF1Q8NEP3 725 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 OR4M1Q8NGD0 313 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 OR8H1Q8NGG4 311 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 OR52N4Q8NGI2 321 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 OR4P4Q8NGL7 312 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 OR8D4Q8NGM9 314 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 OR5M8Q8NGP6 311 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 OR4Q3Q8NH05 313 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 OR51E1Q8TCB6 317 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 PIFOQ8TCI5 191 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 BCAS4Q8TDM0 211 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 HAVCR2Q8TDQ0 301 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 GIPC3Q8TF64 312 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 C17orf50Q8WW18 174 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 EMG1Q92979 244 aaKnown RBP2.78□□□□□ -1.96
XRN1-209ENST00000472625 MYDGFQ969H8 173 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 TOMM40LQ969M1 308 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 RPEQ96AT9 228 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 ASB9Q96DX5 294 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 SEH1LQ96EE3 360 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 OR5M11Q96RB7 305 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 OR8B4Q96RC9 309 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 CDRT15Q96T59 188 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 CHCHD6Q9BRQ6 235 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 ZNF649Q9BS31 505 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 WDR12Q9GZL7 423 aaKnown RBP2.78□□□□□ -1.96
XRN1-209ENST00000472625 ELL3Q9HB65 397 aaPredicted RBP2.78□□□□□ -1.96
XRN1-209ENST00000472625 PALMDQ9NP74 551 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 EXOSC4Q9NPD3 245 aaKnown RBP2.78□□□□□ -1.96
XRN1-209ENST00000472625 FAM206AQ9NX38 181 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 TAS2R3Q9NYW6 316 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 OR6C3Q9NZP0 311 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 MSRB1Q9NZV6 116 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 TAGLN3Q9UI15 199 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 GTF2A1LQ9UNN4 478 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 HILPDAQ9Y5L2 63 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 U3KQK5 164 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 U3KQV3 271 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 V9GYS6 101 aa2.78□□□□□ -1.96
XRN1-209ENST00000472625 LYSTQ99698 3801 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 ARHGAP32A7KAX9 2087 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 A0A087X0M5 115 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 A0A1B0GX30 115 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 FAM230AA0A1W2PPH8 454 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 FAM183AA6NL82 134 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 ZNF729A6NN14 1252 aaPredicted RBP2.77□□□□□ -1.97
XRN1-209ENST00000472625 SERPINE3A8MV23 424 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 H0YHG0 523 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 SH2D1BO14796 132 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 SELENOFO60613 162 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 SULT1C4O75897 302 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 CST1P01037 141 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 CLUP10909 449 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 PSKH1P11801 424 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 VDAC1P21796 283 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 CHATP28329 748 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 CD34P28906 385 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 C21orf33P30042 268 aaPredicted RBP2.77□□□□□ -1.97
XRN1-209ENST00000472625 ATP6V1E1P36543 226 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 GPR12P47775 334 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 OR3A4PP47883 348 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 THBS3P49746 956 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 DLX1P56177 255 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 DLX6P56179 175 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 CXCR4P61073 352 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 ERVK11-1P61568 191 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 BLCAPP62952 87 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 PRB3Q04118 309 aaPredicted RBP2.77□□□□□ -1.97
XRN1-209ENST00000472625 MRPL28Q13084 256 aaKnown RBP2.77□□□□□ -1.97
XRN1-209ENST00000472625 TMED1Q13445 227 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 MADCAM1Q13477 382 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 APOFQ13790 326 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 HES1Q14469 280 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 GINS1Q14691 196 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 PTGES3Q15185 160 aaKnown RBP2.77□□□□□ -1.97
XRN1-209ENST00000472625 HLA-DRB5Q30154 266 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 ABCA11PQ4W5N1 156 aa2.77□□□□□ -1.97
XRN1-209ENST00000472625 CXorf66Q5JRM2 361 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms