RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 TOX4O94842 621 aa12.26□□□□□ -0.45
CDC42SE1-203ENST00000470278 GLIPR1P48060 266 aa12.26□□□□□ -0.45
CDC42SE1-203ENST00000470278 EFNB2P52799 333 aa12.26□□□□□ -0.45
CDC42SE1-203ENST00000470278 PLA2G7Q13093 441 aa12.26□□□□□ -0.45
CDC42SE1-203ENST00000470278 DYNC1I2Q13409 638 aaKnown RBP12.26□□□□□ -0.45
CDC42SE1-203ENST00000470278 BLMHQ13867 455 aa12.26□□□□□ -0.45
CDC42SE1-203ENST00000470278 CHRFAM7AQ494W8 412 aa12.26□□□□□ -0.45
CDC42SE1-203ENST00000470278 IDNKQ5T6J7 187 aa12.26□□□□□ -0.45
CDC42SE1-203ENST00000470278 ZNF497Q6ZNH5 498 aa12.26□□□□□ -0.45
CDC42SE1-203ENST00000470278 C11orf42Q8N5U0 333 aa12.26□□□□□ -0.45
CDC42SE1-203ENST00000470278 NANPQ8TBE9 248 aa12.26□□□□□ -0.45
CDC42SE1-203ENST00000470278 NEDD4LQ96PU5 975 aa12.26□□□□□ -0.45
CDC42SE1-203ENST00000470278 DCSTAMPQ9H295 470 aa12.26□□□□□ -0.45
CDC42SE1-203ENST00000470278 TAS2R3Q9NYW6 316 aa12.26□□□□□ -0.45
CDC42SE1-203ENST00000470278 KIF25Q9UIL4 384 aa12.26□□□□□ -0.45
CDC42SE1-203ENST00000470278 METTL21EPA6NDL7 271 aa12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 SCGNO76038 276 aa12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 ZNF728P0DKX0 622 aa12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 SNRPBP14678 240 aaKnown RBP12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 CCL3L1P16619 93 aa12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 PRTN3P24158 256 aa12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 BLVRBP30043 206 aaPredicted RBP12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 SRSF2Q01130 221 aaKnown RBP12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 KLF17Q5JT82 389 aaPredicted RBP12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 NKAPLQ5M9Q1 402 aa12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 VMO1Q7Z5L0 202 aa12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 NDNFQ8TB73 568 aa12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 NEK7Q8TDX7 302 aa12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 ISOC1Q96CN7 298 aa12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 PCGF1Q9BSM1 259 aa12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 BEX2Q9BXY8 128 aa12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 GAL3ST2Q9H3Q3 398 aa12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 ETAA1Q9NY74 926 aa12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 SPATA2Q9UM82 520 aa12.25□□□□□ -0.45
CDC42SE1-203ENST00000470278 MEIKINA0A087WXM9 373 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 RAB27BO00194 218 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 SOCS1O15524 211 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 NOL3O60936 208 aaKnown RBP12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 CLPXO76031 633 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 PAHP00439 452 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 FAM157CP0CG43 387 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 VEGFCP49767 419 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 BPIFB3P59826 476 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 SCGB2A2Q13296 93 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 NCR3LG1Q68D85 454 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 BRICD5Q6PL45 260 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 IL17RELQ6ZVW7 336 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 C6orf201Q7Z4U5 140 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 TRAPPC6BQ86SZ2 158 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 ZNF565Q8N9K5 539 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 TNFRSF14Q92956 283 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 SULT4A1Q9BR01 284 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 RBM38Q9H0Z9 239 aaKnown RBP12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 LINC00574Q9H8X3 128 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 PLEKHJ1Q9NW61 149 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 RHBDL2Q9NX52 303 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 CEPT1Q9Y6K0 416 aa12.24□□□□□ -0.45
CDC42SE1-203ENST00000470278 TRAV40A0A0B4J280 105 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 ZNF729A6NN14 1252 aaPredicted RBP12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 POM121CA8CG34 1229 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 H3BMQ9 156 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 MT-ND4P03905 459 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 CGB3P0DN86 165 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 CGB7P0DN87 165 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 SRD5A1P18405 259 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 SRP14P37108 136 aaKnown RBP12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 RORCP51449 518 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 TMEM50BP56557 158 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 ERVFRD-1P60508 538 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 PLAC9Q5JTB6 97 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 HEPN1Q6WQI6 88 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 C9orf139Q6ZV77 190 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 ZNF554Q86TJ5 538 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 OR13A1Q8NGR1 328 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 OR10R2Q8NGX6 335 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 ACOT12Q8WYK0 555 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 AP3S1Q92572 193 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 SLC25A38Q96DW6 304 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 RAB3CQ96E17 227 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 ARHGAP5-AS1Q96IT6 56 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 SIRT7Q9NRC8 400 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 MBNL3Q9NUK0 354 aaKnown RBP12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 NUP50Q9UKX7 468 aa12.23□□□□□ -0.45
CDC42SE1-203ENST00000470278 A0A0A6YYH2 397 aa12.22□□□□□ -0.45
CDC42SE1-203ENST00000470278 CENPVL3A0A0U1RRI6 287 aa12.22□□□□□ -0.45
CDC42SE1-203ENST00000470278 KBTBD11-OT1A0A1B0GTJ5 212 aa12.22□□□□□ -0.45
CDC42SE1-203ENST00000470278 UBE2QL1A1L167 161 aa12.22□□□□□ -0.45
CDC42SE1-203ENST00000470278 A6NJ64 397 aa12.22□□□□□ -0.45
CDC42SE1-203ENST00000470278 SERPINE3A8MV23 424 aa12.22□□□□□ -0.45
CDC42SE1-203ENST00000470278 ZNF701M0R085 212 aaPredicted RBP12.22□□□□□ -0.45
CDC42SE1-203ENST00000470278 MFNGO00587 321 aa12.22□□□□□ -0.45
CDC42SE1-203ENST00000470278 NAPSAO96009 420 aa12.22□□□□□ -0.45
CDC42SE1-203ENST00000470278 IGHV1-8P0DP01 117 aa12.22□□□□□ -0.45
CDC42SE1-203ENST00000470278 IGHV4-38-2P0DP08 117 aa12.22□□□□□ -0.45
CDC42SE1-203ENST00000470278 HIST1H1DP16402 221 aaKnown RBP12.22□□□□□ -0.45
CDC42SE1-203ENST00000470278 GLP1RP43220 463 aa12.22□□□□□ -0.45
CDC42SE1-203ENST00000470278 GUCA2AQ02747 115 aa12.22□□□□□ -0.45
CDC42SE1-203ENST00000470278 SPCS2Q15005 226 aa12.22□□□□□ -0.45
CDC42SE1-203ENST00000470278 ARL6IP1Q15041 203 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms