RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 LAMB1P07942 1786 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 CENPEQ02224 2701 aa2.78□□□□□ -1.96
LSM5-209ENST00000468872 VWFP04275 2813 aa2.78□□□□□ -1.97
LSM5-209ENST00000468872 COL5A1P20908 1838 aaPredicted RBP2.77□□□□□ -1.97
LSM5-209ENST00000468872 MGAQ8IWI9 3026 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 TONSLQ96HA7 1378 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 ANKRD12Q6UB98 2062 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 TRAV8-7A0A075B6U6 113 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 TVP23AA6NH52 213 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 SEC14L6B5MCN3 397 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 PRMT5O14744 637 aaPredicted RBP2.77□□□□□ -1.97
LSM5-209ENST00000468872 BRI3O95415 125 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 LHBP01229 141 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 RHOCP08134 193 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 FUT5Q11128 374 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 C18orf21Q32NC0 220 aaPredicted RBP2.77□□□□□ -1.97
LSM5-209ENST00000468872 KLHL12Q53G59 568 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 HHATQ5VTY9 493 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 APOBEC3HQ6NTF7 200 aaKnown RBP2.77□□□□□ -1.97
LSM5-209ENST00000468872 PID1Q7Z2X4 250 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 MIR7-3HGQ8N6C7 128 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 OR2M7Q8NG81 312 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 OR5M1Q8NGP8 315 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 ACBD6Q9BR61 282 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 LLPHQ9BRT6 129 aaKnown RBP2.77□□□□□ -1.97
LSM5-209ENST00000468872 UTP23Q9BRU9 249 aaKnown RBP2.77□□□□□ -1.97
LSM5-209ENST00000468872 RAB1BQ9H0U4 201 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 CSNK1G1Q9HCP0 422 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 C6orf50Q9HD87 102 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 ZNF302Q9NR11 478 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 DDIT4Q9NX09 232 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 TFR2Q9UP52 801 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 CFL2Q9Y281 166 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 POFUT2Q9Y2G5 429 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 C15orf41Q9Y2V0 281 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 AKAP9Q99996 3911 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 CD163L1Q9NR16 1453 aa2.77□□□□□ -1.97
LSM5-209ENST00000468872 ATMQ13315 3056 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 LOC102724200A0A096LPH7 203 aaPredicted RBP2.76□□□□□ -1.97
LSM5-209ENST00000468872 IGKV1-6A0A0C4DH72 117 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 FAM240AA0A1B0GVK7 77 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 ISPDA4D126 451 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 M0R1B8 84 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 NDUFS5O43920 106 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 SCO1O75880 301 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 VAPBO95292 243 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 IGKV1-39P01597 117 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 IGKV1D-39P04432 117 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 LIPCP11150 499 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 P2RY2P41231 377 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 GRB2P62993 217 aaKnown RBP2.76□□□□□ -1.97
LSM5-209ENST00000468872 GPR176Q14439 515 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 CLEC6AQ6EIG7 209 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 THOC7Q6I9Y2 204 aaKnown RBP2.76□□□□□ -1.97
LSM5-209ENST00000468872 SETD3Q86TU7 594 aaPredicted RBP2.76□□□□□ -1.97
LSM5-209ENST00000468872 ST13P4Q8IZP2 240 aaPredicted RBP2.76□□□□□ -1.97
LSM5-209ENST00000468872 SYCE1Q8N0S2 351 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 ORMDL3Q8N138 153 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 SYS1Q8N2H4 156 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 LRRC20Q8TCA0 184 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 OPTNQ96CV9 577 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 MRPL48Q96GC5 212 aaKnown RBP2.76□□□□□ -1.97
LSM5-209ENST00000468872 CPB2Q96IY4 423 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 HINT2Q9BX68 163 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 LINC00574Q9H8X3 128 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 STMN3Q9NZ72 180 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 CSMD2Q7Z408 3487 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 DDX60Q8IY21 1712 aaKnown RBP2.76□□□□□ -1.97
LSM5-209ENST00000468872 ANKRD50Q9ULJ7 1429 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 CACNA1DQ01668 2161 aa2.76□□□□□ -1.97
LSM5-209ENST00000468872 COL27A1Q8IZC6 1860 aaPredicted RBP2.75□□□□□ -1.97
LSM5-209ENST00000468872 GBF1Q92538 1859 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 SVILO95425 2214 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 TMEM72A0PK05 275 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 LOC730098B7Z3J9 87 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 GATCO43716 136 aaKnown RBP2.75□□□□□ -1.97
LSM5-209ENST00000468872 OR7C2O60412 319 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 NDUFS6O75380 124 aaKnown RBP2.75□□□□□ -1.97
LSM5-209ENST00000468872 E2F6O75461 281 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 IGKV1D-16P01601 117 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 TGFBR1P36897 503 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 ANP32AP39687 249 aaKnown RBP2.75□□□□□ -1.97
LSM5-209ENST00000468872 KCNJ3P48549 501 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 SP6Q3SY56 376 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 CDNFQ49AH0 187 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 TTC32Q5I0X7 151 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 PRSS54Q6PEW0 395 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 OR6N2Q8NGY6 317 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 HGDQ93099 445 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 BBS2Q9BXC9 721 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 COA1Q9GZY4 146 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 OR52A5Q9H2C5 316 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 SND1-IT1Q9HBX3 110 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 ZNF229Q9UJW7 825 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 ORC6Q9Y5N6 252 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 ENPP4Q9Y6X5 453 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 COL4A1P02462 1669 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 SCN1AP35498 2009 aa2.75□□□□□ -1.97
LSM5-209ENST00000468872 APC2O95996 2303 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 IGHV3OR16-8A0A075B7F1 116 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms