RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 FUT3P21217 361 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 CHATP28329 748 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 C17orf58Q2M2W7 97 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 HES5Q5TA89 166 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 BRICD5Q6PL45 260 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 HEPN1Q6WQI6 88 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 ZNF782Q6ZMW2 699 aaPredicted RBP16.57■□□□□ 0.24
SKA3-205ENST00000465471 ZNF497Q6ZNH5 498 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 GDPGP1Q6ZNW5 385 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 TRAPPC6BQ86SZ2 158 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 PNKDQ8N490 385 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 FAM89BQ8N5H3 189 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 ZDHHC22Q8N966 263 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 OR51D1Q8NGF3 324 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 OR13A1Q8NGR1 328 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 CYYR1Q96J86 154 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 NICN1Q9BSH3 213 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 CENPOQ9BU64 300 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 LPAR5Q9H1C0 372 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 RNF167Q9H6Y7 350 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 ING3Q9NXR8 418 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 SESN1Q9Y6P5 492 aa16.57■□□□□ 0.24
SKA3-205ENST00000465471 MMP23AO75900 390 aa16.56■□□□□ 0.24
SKA3-205ENST00000465471 SRSF2Q01130 221 aaKnown RBP16.56■□□□□ 0.24
SKA3-205ENST00000465471 RBM39Q14498 530 aaKnown RBP16.56■□□□□ 0.24
SKA3-205ENST00000465471 C2orf76Q3KRA6 126 aa16.56■□□□□ 0.24
SKA3-205ENST00000465471 TIMM50Q3ZCQ8 353 aa16.56■□□□□ 0.24
SKA3-205ENST00000465471 MIDNQ504T8 468 aa16.56■□□□□ 0.24
SKA3-205ENST00000465471 AJUBAQ96IF1 538 aa16.56■□□□□ 0.24
SKA3-205ENST00000465471 JMJD8Q96S16 334 aa16.56■□□□□ 0.24
SKA3-205ENST00000465471 PEX16Q9Y5Y5 336 aa16.56■□□□□ 0.24
SKA3-205ENST00000465471 LOC100506127A0A0U1RQW1 187 aa16.55■□□□□ 0.24
SKA3-205ENST00000465471 TMEM272A0A1B0GTI8 110 aa16.55■□□□□ 0.24
SKA3-205ENST00000465471 TMEM30CPA0ZSE6 113 aa16.55■□□□□ 0.24
SKA3-205ENST00000465471 FOXI3A8MTJ6 420 aaPredicted RBP16.55■□□□□ 0.24
SKA3-205ENST00000465471 NOTOA8MTQ0 251 aa16.55■□□□□ 0.24
SKA3-205ENST00000465471 ODF3BA8MYP8 253 aa16.55■□□□□ 0.24
SKA3-205ENST00000465471 MCRIP1C9JLW8 97 aa16.55■□□□□ 0.24
SKA3-205ENST00000465471 SAA4P35542 130 aa16.55■□□□□ 0.24
SKA3-205ENST00000465471 GDNFP39905 211 aa16.55■□□□□ 0.24
SKA3-205ENST00000465471 GLP1RP43220 463 aa16.55■□□□□ 0.24
SKA3-205ENST00000465471 OR11H6Q8NGC7 330 aa16.55■□□□□ 0.24
SKA3-205ENST00000465471 OR13F1Q8NGS4 319 aa16.55■□□□□ 0.24
SKA3-205ENST00000465471 KBTBD11-OT1A0A1B0GTJ5 212 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 A0A1W2PRD5 423 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 A0A1W2PRF3 423 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 A0A1W2PRM7 423 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 NPIPB11E5RHQ5 1161 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 CA11O75493 328 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 MT-ND4P03905 459 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 COX7A1P24310 79 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 CDK2P24941 298 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 SDC2P34741 201 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 PLA2G7Q13093 441 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 PRAMEF5Q5TYX0 476 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 ZNF626Q68DY1 528 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 RBMS3Q6XE24 437 aaKnown RBP16.54■□□□□ 0.24
SKA3-205ENST00000465471 Q6YL49 198 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 LDLRAD3Q86YD5 345 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 ZNF565Q8N9K5 539 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 OR13D1Q8NGV5 346 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 ZFAND2BQ8WV99 257 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 DYRK2Q92630 601 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 URM1Q9BTM9 101 aaKnown RBP16.54■□□□□ 0.24
SKA3-205ENST00000465471 TMEM133Q9H2Q1 129 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 ETAA1Q9NY74 926 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 CALYQ9NYX4 217 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 COL6A5A8TX70 2615 aa16.54■□□□□ 0.24
SKA3-205ENST00000465471 A0A087X0M5 115 aa16.53■□□□□ 0.24
SKA3-205ENST00000465471 A0A1B0GX30 115 aa16.53■□□□□ 0.24
SKA3-205ENST00000465471 SMIM30A4D0T7 59 aa16.53■□□□□ 0.24
SKA3-205ENST00000465471 DNAJC9-AS1A6NH13 148 aa16.53■□□□□ 0.24
SKA3-205ENST00000465471 CLDN34H7C241 214 aa16.53■□□□□ 0.24
SKA3-205ENST00000465471 IL1AP01583 271 aa16.53■□□□□ 0.24
SKA3-205ENST00000465471 CD34P28906 385 aa16.53■□□□□ 0.24
SKA3-205ENST00000465471 KRTAP24-1Q3LI83 254 aa16.53■□□□□ 0.24
SKA3-205ENST00000465471 MRGPRDQ8TDS7 321 aa16.53■□□□□ 0.24
SKA3-205ENST00000465471 NEK7Q8TDX7 302 aa16.53■□□□□ 0.24
SKA3-205ENST00000465471 SULT4A1Q9BR01 284 aa16.53■□□□□ 0.24
SKA3-205ENST00000465471 MRPS26Q9BYN8 205 aaKnown RBP16.53■□□□□ 0.24
SKA3-205ENST00000465471 LIN7BQ9HAP6 207 aa16.53■□□□□ 0.24
SKA3-205ENST00000465471 IGHV2-26A0A0B4J1V2 119 aa16.52■□□□□ 0.24
SKA3-205ENST00000465471 A0A0B4J203 849 aa16.52■□□□□ 0.24
SKA3-205ENST00000465471 MEIOCA2RUB1 952 aa16.52■□□□□ 0.24
SKA3-205ENST00000465471 AIREO43918 545 aa16.52■□□□□ 0.24
SKA3-205ENST00000465471 MELTFP08582 738 aa16.52■□□□□ 0.24
SKA3-205ENST00000465471 CLEC2LP0C7M8 214 aa16.52■□□□□ 0.24
SKA3-205ENST00000465471 SLC2A2P11168 524 aaPredicted RBP16.52■□□□□ 0.24
SKA3-205ENST00000465471 UBA52P62987 128 aaKnown RBP16.52■□□□□ 0.24
SKA3-205ENST00000465471 BAMBIQ13145 260 aa16.52■□□□□ 0.24
SKA3-205ENST00000465471 OR52W1Q6IF63 320 aa16.52■□□□□ 0.24
SKA3-205ENST00000465471 SFXN4Q6P4A7 337 aa16.52■□□□□ 0.24
SKA3-205ENST00000465471 BAIAP2L2Q6UXY1 529 aa16.52■□□□□ 0.24
SKA3-205ENST00000465471 C17orf50Q8WW18 174 aa16.52■□□□□ 0.24
SKA3-205ENST00000465471 PTX4Q96A99 478 aa16.52■□□□□ 0.24
SKA3-205ENST00000465471 KIRREL1Q96J84 757 aa16.52■□□□□ 0.24
SKA3-205ENST00000465471 NEDD4LQ96PU5 975 aa16.52■□□□□ 0.24
SKA3-205ENST00000465471 ZMAT3Q9HA38 289 aaKnown RBP16.52■□□□□ 0.24
SKA3-205ENST00000465471 ZNRD1Q9P1U0 126 aa16.52■□□□□ 0.24
SKA3-205ENST00000465471 RAB22AQ9UL26 194 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms