RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SYNPRQ8TBG9 265 aa2.97□□□□□ -1.93
SCFD1-204ENST00000463622 ITLN1Q8WWA0 313 aa2.97□□□□□ -1.93
SCFD1-204ENST00000463622 OR5P3Q8WZ94 311 aa2.97□□□□□ -1.93
SCFD1-204ENST00000463622 YIPF5Q969M3 257 aa2.97□□□□□ -1.93
SCFD1-204ENST00000463622 ADAT1Q9BUB4 502 aaKnown RBP2.97□□□□□ -1.93
SCFD1-204ENST00000463622 PAPOLGQ9BWT3 736 aaKnown RBP2.97□□□□□ -1.93
SCFD1-204ENST00000463622 SUCNR1Q9BXA5 334 aa2.97□□□□□ -1.93
SCFD1-204ENST00000463622 BCL2L14Q9BZR8 327 aa2.97□□□□□ -1.93
SCFD1-204ENST00000463622 RAB1BQ9H0U4 201 aa2.97□□□□□ -1.93
SCFD1-204ENST00000463622 DCSTAMPQ9H295 470 aa2.97□□□□□ -1.93
SCFD1-204ENST00000463622 MIXL1Q9H2W2 232 aa2.97□□□□□ -1.93
SCFD1-204ENST00000463622 PLEKHA2Q9HB19 425 aa2.97□□□□□ -1.93
SCFD1-204ENST00000463622 SNTG1Q9NSN8 517 aa2.97□□□□□ -1.93
SCFD1-204ENST00000463622 EIF3KQ9UBQ5 218 aaKnown RBP2.97□□□□□ -1.93
SCFD1-204ENST00000463622 DUX4Q9UBX2 424 aa2.97□□□□□ -1.93
SCFD1-204ENST00000463622 ZNF816-ZNF321PA0A0X1KG74 233 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 CCDC160A6NGH7 325 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 HMX3A6NHT5 357 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 C17orf100A8MU93 164 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 ZNF732B4DXR9 585 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 SULT1B1O43704 296 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 KDM4BO94953 1096 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 CST4P01036 141 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 NRASP01111 189 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 SFTPBP07988 381 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 PTHLHP12272 177 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 SRMP19623 302 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 PRTN3P24158 256 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 MT3P25713 68 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 PSMA1P25786 263 aaKnown RBP2.96□□□□□ -1.94
SCFD1-204ENST00000463622 RAD52P43351 418 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 POU3F4P49335 361 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 CEBPDP49716 269 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-204ENST00000463622 GPM6AP51674 278 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 TMBIM6P55061 237 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 KLF3P57682 345 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-204ENST00000463622 CCL8P80075 99 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 QRFPP83859 136 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 RIPPLY1Q0D2K3 151 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 UNC119Q13432 240 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 ZNF718Q3SXZ3 478 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 MOGAT2Q3SYC2 334 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 CLVS2Q5SYC1 327 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 DDI2Q5TDH0 399 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 GFI1BQ5VTD9 330 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 DGAT2L7PQ6IED9 249 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 UTS2BQ765I0 119 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 C5orf24Q7Z6I8 188 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 EGFL6Q8IUX8 553 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 ZDHHC23Q8IYP9 409 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 MS4A15Q8N5U1 240 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 TMEM104Q8NE00 496 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 OR2Z1Q8NG97 314 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 CLDND2Q8NHS1 167 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 SLAMF9Q96A28 289 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 SLC25A38Q96DW6 304 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 MRPL48Q96GC5 212 aaKnown RBP2.96□□□□□ -1.94
SCFD1-204ENST00000463622 GAL3ST1Q99999 423 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 NPFFR1Q9GZQ6 430 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 SLIRPQ9GZT3 109 aaKnown RBP2.96□□□□□ -1.94
SCFD1-204ENST00000463622 WDR13Q9H1Z4 485 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 RGCCQ9H4X1 137 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 SP140LQ9H930 580 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 VCX3AQ9NNX9 186 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 UFSP2Q9NUQ7 469 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 MTCH1Q9NZJ7 389 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 NLKQ9UBE8 527 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 RSL24D1Q9UHA3 163 aaKnown RBP2.96□□□□□ -1.94
SCFD1-204ENST00000463622 ELF5Q9UKW6 265 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-204ENST00000463622 SSR3Q9UNL2 185 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 CMAHPQ9Y471 501 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 MMP24Q9Y5R2 645 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 CMYA5Q8N3K9 4069 aa2.96□□□□□ -1.94
SCFD1-204ENST00000463622 ARFGEF3Q5TH69 2177 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 LOC105371242A0A075B767 164 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 IGHV3OR15-7A0A075B7D8 119 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 TRAV1-2A0A0B4J238 106 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 SMIM31A0A1B0GVY4 71 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 CLDN34H7C241 214 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 J3QLI3 93 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 CTDSP2O14595 271 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 LDLRAD4O15165 306 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 SLC22A1O15245 554 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 GATBO75879 557 aaKnown RBP2.95□□□□□ -1.94
SCFD1-204ENST00000463622 CYB5R3P00387 301 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-204ENST00000463622 APOC1P02654 83 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 SELLP14151 372 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 RAB3AP20336 220 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 RAB3BP20337 219 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 BCL3P20749 454 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 PAX7P23759 505 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 COL8A2P25067 703 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 BDKRB2P30411 391 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 CD80P33681 288 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 SNU13P55769 128 aaKnown RBP2.95□□□□□ -1.94
SCFD1-204ENST00000463622 TMEM33P57088 247 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 SEC61A1P61619 476 aaKnown RBP2.95□□□□□ -1.94
SCFD1-204ENST00000463622 OR8G1Q15617 311 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 KISS1Q15726 138 aa2.95□□□□□ -1.94
SCFD1-204ENST00000463622 FAHD2BQ6P2I3 314 aaPredicted RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms