RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 MALSU1Q96EH3 234 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 UQCC2Q9BRT2 126 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 BANF2Q9H503 90 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 IFT22Q9H7X7 185 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 RAB18Q9NP72 206 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 CALYQ9NYX4 217 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 HILPDAQ9Y5L2 63 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 MINOS1-NBL1R4GNA1 71 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 DSCAML1Q8TD84 2053 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 KBTBD11-OT1A0A1B0GTJ5 212 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 TMEM30CPA0ZSE6 113 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 FAM90A8PA6NJQ4 464 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 F2RL2O00254 374 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 MGMTP16455 207 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 HTR1DP28221 377 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 GDNFP39905 211 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 KRTAP10-3P60369 221 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 RPS25P62851 125 aaKnown RBP12.44□□□□□ -0.42
VARS-219ENST00000461328 MLLT11Q13015 90 aaPredicted RBP12.44□□□□□ -0.42
VARS-219ENST00000461328 RBM39Q14498 530 aaKnown RBP12.44□□□□□ -0.42
VARS-219ENST00000461328 LTC4SQ16873 150 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 RSBN1Q5VWQ0 802 aaPredicted RBP12.44□□□□□ -0.42
VARS-219ENST00000461328 ZNF367Q7RTV3 350 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 RTN4RL2Q86UN3 420 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 DYNAPQ8N1N2 210 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 PHYHIPQ92561 330 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 FAM46BQ96A09 425 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 MRPS24Q96EL2 167 aaKnown RBP12.44□□□□□ -0.42
VARS-219ENST00000461328 SELENOIQ9C0D9 397 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 SPACA1Q9HBV2 294 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 MGAM2Q2M2H8 2515 aa12.44□□□□□ -0.42
VARS-219ENST00000461328 TRAV39A0A0B4J263 110 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 M0QZ24 198 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 TIMM23O14925 209 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 IL1AP01583 271 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 PSMA1P25786 263 aaKnown RBP12.43□□□□□ -0.42
VARS-219ENST00000461328 GABRA5P31644 462 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 TPBGQ13641 420 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 TRAM1Q15629 374 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 TBCEQ15813 527 aaPredicted RBP12.43□□□□□ -0.42
VARS-219ENST00000461328 C17orf58Q2M2W7 97 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 SLC35E4Q6ICL7 350 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 UNQ9370/PRO34162Q6UXP9 181 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 LIAT1Q6ZQX7 453 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 OR4P4Q8NGL7 312 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 OR4C13Q8NGP0 309 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 KIRREL1Q96J84 757 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 MGLLQ99685 303 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 CST11Q9H112 138 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 ZNF286AQ9HBT8 521 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 ISYNA1Q9NPH2 558 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 IDI2-AS1Q9NZ38 188 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 PKD1L1Q8TDX9 2849 aa12.43□□□□□ -0.42
VARS-219ENST00000461328 VGLL3A8MV65 326 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 MCRIP1C9JLW8 97 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 AIPO00170 330 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 MPIG6BO95866 241 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 UCHL1P09936 223 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 CPEP16870 476 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 SRMP19623 302 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 SSTR5P35346 364 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 RAB13P51153 203 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 ARHGDIBP52566 201 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 PRRX1P54821 245 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 LDLRAD2Q5SZI1 272 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 LRRTM1Q86UE6 522 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 TMEM104Q8NE00 496 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 RFESDQ8TAC1 157 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 NPFFR1Q9GZQ6 430 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 NCOR1P1Q9H4R4 102 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 DPM3Q9P2X0 92 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 GHRLQ9UBU3 117 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 TCF19Q9Y242 345 aa12.42□□□□□ -0.42
VARS-219ENST00000461328 SC5DO75845 299 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 ARL6IP5O75915 188 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 IGHV3-7P01780 117 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 UBBP0CG47 229 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 CD34P28906 385 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 CEACAM3P40198 252 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 GNG10P50151 68 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 GABARAPL2P60520 117 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 PAX5Q02548 391 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 HLA-DRB5Q30154 266 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 RAB12Q6IQ22 244 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 TMEM219Q86XT9 240 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 SVOPQ8N4V2 548 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 PIFOQ8TCI5 191 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 CCDC107Q8WV48 283 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 CREB3L1Q96BA8 519 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 RANBP3Q9H6Z4 567 aaPredicted RBP12.41□□□□□ -0.42
VARS-219ENST00000461328 PLGRKTQ9HBL7 147 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 ETAA1Q9NY74 926 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 FBLN5Q9UBX5 448 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 PITPNC1Q9UKF7 332 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 SIGLEC9Q9Y336 463 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 AMMECR1Q9Y4X0 333 aaPredicted RBP12.41□□□□□ -0.42
VARS-219ENST00000461328 PEX16Q9Y5Y5 336 aa12.41□□□□□ -0.42
VARS-219ENST00000461328 FAM90A10PA6NDY2 464 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 FAM90A18PA6NE21 464 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 FAM90A16PA6NEW6 464 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms