RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 C11orf88Q6PI97 169 aa18.55■□□□□ 0.56
PTPN4-208ENST00000460289 GLIPR1L1Q6UWM5 242 aa18.55■□□□□ 0.56
PTPN4-208ENST00000460289 BAIAP2L2Q6UXY1 529 aa18.55■□□□□ 0.56
PTPN4-208ENST00000460289 PLPPR1Q8TBJ4 325 aa18.55■□□□□ 0.56
PTPN4-208ENST00000460289 OR5M11Q96RB7 305 aa18.55■□□□□ 0.56
PTPN4-208ENST00000460289 DUSP21Q9H596 190 aa18.55■□□□□ 0.56
PTPN4-208ENST00000460289 LSM2Q9Y333 95 aaKnown RBP18.55■□□□□ 0.56
PTPN4-208ENST00000460289 LEUTXA8MZ59 168 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 F2RL2O00254 374 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 TIMM23O14925 209 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 IGLV1-47P01700 117 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 GDNFP39905 211 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 CEACAM3P40198 252 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 ARHGDIBP52566 201 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 KRTAP10-3P60369 221 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 ATAD3CQ5T2N8 411 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 AWAT2Q6E213 333 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 UNQ9370/PRO34162Q6UXP9 181 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 OR13A1Q8NGR1 328 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 OR2T6Q8NHC8 308 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 UQCC2Q9BRT2 126 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 LINC00574Q9H8X3 128 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 SPACA1Q9HBV2 294 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 TCF7L1Q9HCS4 588 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 CALYQ9NYX4 217 aa18.54■□□□□ 0.56
PTPN4-208ENST00000460289 A6NDX4 124 aa18.53■□□□□ 0.56
PTPN4-208ENST00000460289 RGS10O43665 173 aa18.53■□□□□ 0.56
PTPN4-208ENST00000460289 CHST1O43916 411 aa18.53■□□□□ 0.56
PTPN4-208ENST00000460289 GZMHP20718 246 aa18.53■□□□□ 0.56
PTPN4-208ENST00000460289 NFYBP25208 207 aa18.53■□□□□ 0.56
PTPN4-208ENST00000460289 IRF3Q14653 427 aa18.53■□□□□ 0.56
PTPN4-208ENST00000460289 OR10A7Q8NGE5 316 aa18.53■□□□□ 0.56
PTPN4-208ENST00000460289 KIRREL1Q96J84 757 aa18.53■□□□□ 0.56
PTPN4-208ENST00000460289 ZNF286AQ9HBT8 521 aa18.53■□□□□ 0.56
PTPN4-208ENST00000460289 IDI2-AS1Q9NZ38 188 aa18.53■□□□□ 0.56
PTPN4-208ENST00000460289 A0A1W2PP11 408 aa18.52■□□□□ 0.56
PTPN4-208ENST00000460289 FAM172BPA6NC97 362 aa18.52■□□□□ 0.56
PTPN4-208ENST00000460289 M0QZ24 198 aa18.52■□□□□ 0.56
PTPN4-208ENST00000460289 IL1AP01583 271 aa18.52■□□□□ 0.56
PTPN4-208ENST00000460289 BRS3P32247 399 aa18.52■□□□□ 0.56
PTPN4-208ENST00000460289 HLA-DRB5Q30154 266 aa18.52■□□□□ 0.56
PTPN4-208ENST00000460289 CCBE1Q6UXH8 406 aaPredicted RBP18.52■□□□□ 0.56
PTPN4-208ENST00000460289 TREML4Q6UXN2 200 aa18.52■□□□□ 0.56
PTPN4-208ENST00000460289 IZUMO2Q6UXV1 221 aa18.52■□□□□ 0.56
PTPN4-208ENST00000460289 LYPD6Q86Y78 171 aa18.52■□□□□ 0.56
PTPN4-208ENST00000460289 OR9G1Q8NH87 305 aa18.52■□□□□ 0.56
PTPN4-208ENST00000460289 MRGPRDQ8TDS7 321 aa18.52■□□□□ 0.56
PTPN4-208ENST00000460289 SGCDQ92629 289 aa18.52■□□□□ 0.56
PTPN4-208ENST00000460289 TMED9Q9BVK6 235 aa18.52■□□□□ 0.56
PTPN4-208ENST00000460289 ZNF581Q9P0T4 197 aa18.52■□□□□ 0.56
PTPN4-208ENST00000460289 GHRLQ9UBU3 117 aa18.52■□□□□ 0.56
PTPN4-208ENST00000460289 MGAM2Q2M2H8 2515 aa18.51■□□□□ 0.55
PTPN4-208ENST00000460289 TMEM30CPA0ZSE6 113 aa18.51■□□□□ 0.55
PTPN4-208ENST00000460289 FAM90A22PA8MWA6 464 aa18.51■□□□□ 0.55
PTPN4-208ENST00000460289 NPIPB11E5RHQ5 1161 aa18.51■□□□□ 0.55
PTPN4-208ENST00000460289 BUB1B-PAK6H3BSN5 160 aa18.51■□□□□ 0.55
PTPN4-208ENST00000460289 RBM39Q14498 530 aaKnown RBP18.51■□□□□ 0.55
PTPN4-208ENST00000460289 SLC16A12Q6ZSM3 486 aa18.51■□□□□ 0.55
PTPN4-208ENST00000460289 NEK7Q8TDX7 302 aa18.51■□□□□ 0.55
PTPN4-208ENST00000460289 PHYHIPQ92561 330 aa18.51■□□□□ 0.55
PTPN4-208ENST00000460289 UFD1Q92890 307 aa18.51■□□□□ 0.55
PTPN4-208ENST00000460289 MCRIP1C9JLW8 97 aa18.5■□□□□ 0.55
PTPN4-208ENST00000460289 CRHBPP24387 322 aa18.5■□□□□ 0.55
PTPN4-208ENST00000460289 EFNB2P52799 333 aa18.5■□□□□ 0.55
PTPN4-208ENST00000460289 CEACAM19Q7Z692 300 aa18.5■□□□□ 0.55
PTPN4-208ENST00000460289 TMEM219Q86XT9 240 aa18.5■□□□□ 0.55
PTPN4-208ENST00000460289 CCDC90BQ9GZT6 254 aa18.5■□□□□ 0.55
PTPN4-208ENST00000460289 MMP28Q9H239 520 aa18.5■□□□□ 0.55
PTPN4-208ENST00000460289 ISYNA1Q9NPH2 558 aa18.5■□□□□ 0.55
PTPN4-208ENST00000460289 SIGLEC9Q9Y336 463 aa18.5■□□□□ 0.55
PTPN4-208ENST00000460289 PKD1L1Q8TDX9 2849 aa18.5■□□□□ 0.55
PTPN4-208ENST00000460289 FAM90A10PA6NDY2 464 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 FAM90A18PA6NE21 464 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 FAM90A16PA6NEW6 464 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 FAM90A20PA6NIJ5 464 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 FAM90A7PA6NKC0 464 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 FAM90A12PA8MX19 464 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 FAM90A5PA8MXJ8 464 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 FAM90A23PA8MXZ1 464 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 OOSP1A8MZH6 123 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 CRTAPO75718 401 aaPredicted RBP18.49■□□□□ 0.55
PTPN4-208ENST00000460289 FAM90A15PP0C7V4 464 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 FAM90A13PP0C7W8 464 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 FAM90A14PP0C7W9 464 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 FAM90A24PP0C7X0 464 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 JUNBP17275 347 aaPredicted RBP18.49■□□□□ 0.55
PTPN4-208ENST00000460289 SRMP19623 302 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 INSL4Q14641 139 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 LIPKQ5VXJ0 399 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 GLT8D1Q68CQ7 371 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 CCDC144NLQ6NUI1 221 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 PRSS48Q7RTY5 328 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 RFESDQ8TAC1 157 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 SELENOIQ9C0D9 397 aa18.49■□□□□ 0.55
PTPN4-208ENST00000460289 RCC2Q9P258 522 aaKnown RBP18.49■□□□□ 0.55
PTPN4-208ENST00000460289 AMMECR1Q9Y4X0 333 aaPredicted RBP18.49■□□□□ 0.55
PTPN4-208ENST00000460289 LY6LH3BQJ8 138 aa18.48■□□□□ 0.55
PTPN4-208ENST00000460289 J3QR06 171 aa18.48■□□□□ 0.55
PTPN4-208ENST00000460289 SC5DO75845 299 aa18.48■□□□□ 0.55
PTPN4-208ENST00000460289 UBBP0CG47 229 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms