RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 PYDC2Q56P42 97 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 GLT8D1Q68CQ7 371 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 ANKRD16Q6P6B7 361 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 CISD2Q8N5K1 135 aaKnown RBP8.95□□□□□ -0.98
HERC4-207ENST00000460168 OR51A2Q8NGJ7 313 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 OR1L6Q8NGR2 347 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 OR1K1Q8NGR3 316 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 ADAT3Q96EY9 351 aaPredicted RBP8.95□□□□□ -0.98
HERC4-207ENST00000460168 RGCCQ9H4X1 137 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 ZZEF1O43149 2961 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 MEGF11A6BM72 1044 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 C5orf63A6NC05 138 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 OR5H1A6NKK0 313 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 IGFBP3P17936 291 aaPredicted RBP8.95□□□□□ -0.98
HERC4-207ENST00000460168 KIR2DL2P43627 348 aaPredicted RBP8.95□□□□□ -0.98
HERC4-207ENST00000460168 SCAND1P57086 179 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 RAB1AP62820 205 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 RBPJQ06330 500 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 UBE2V1Q13404 147 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 ZNF660Q6AZW8 331 aaPredicted RBP8.95□□□□□ -0.98
HERC4-207ENST00000460168 Q6ZT83 130 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 TMEM144Q7Z5S9 345 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 JAGN1Q8N5M9 183 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 PNLDC1Q8NA58 520 aaKnown RBP8.95□□□□□ -0.98
HERC4-207ENST00000460168 Q8NA96 180 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 OR56B1Q8NGI3 324 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 GLMPQ8WWB7 406 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 FAAP24Q9BTP7 215 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 STEAP1Q9UHE8 339 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 PPP1R3CQ9UQK1 317 aa8.95□□□□□ -0.98
HERC4-207ENST00000460168 CHD8Q9HCK8 2581 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 MBD3L4A6NDZ8 208 aaPredicted RBP8.94□□□□□ -0.98
HERC4-207ENST00000460168 MBD3L3A6NE82 208 aaPredicted RBP8.94□□□□□ -0.98
HERC4-207ENST00000460168 MBD3L5A6NJ08 208 aaPredicted RBP8.94□□□□□ -0.98
HERC4-207ENST00000460168 ADAP1O75689 374 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 RAD51DO75771 328 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 DHRS3O75911 302 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 CCL1P22362 96 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 NFYAP23511 347 aaPredicted RBP8.94□□□□□ -0.98
HERC4-207ENST00000460168 NFYBP25208 207 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 HGFACQ04756 655 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 PLP2Q04941 152 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 FOXF2Q12947 444 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 SNTB2Q13425 540 aaKnown RBP8.94□□□□□ -0.98
HERC4-207ENST00000460168 UBE2NLQ5JXB2 153 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 GSG1LQ6UXU4 331 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 OR13C9Q8NGT0 318 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 MBD3L2Q8NHZ7 208 aaPredicted RBP8.94□□□□□ -0.98
HERC4-207ENST00000460168 DVL3Q92997 716 aaPredicted RBP8.94□□□□□ -0.98
HERC4-207ENST00000460168 CNTNAP3BQ96NU0 1288 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 NKX3-1Q99801 234 aaPredicted RBP8.94□□□□□ -0.98
HERC4-207ENST00000460168 CNTNAP3Q9BZ76 1288 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 TLNRD1Q9H1K6 362 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 ARV1Q9H2C2 271 aa8.94□□□□□ -0.98
HERC4-207ENST00000460168 DSPP15924 2871 aaKnown RBP8.94□□□□□ -0.98
HERC4-207ENST00000460168 ZNF503-AS2A6NEH8 195 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 LYZL6O75951 148 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 UBL3O95164 117 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 CALCBP10092 127 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 GTF2F2P13984 249 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 ACKR3P25106 362 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 GSG1Q2KHT4 349 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 OCIAD2Q56VL3 154 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 GLYATL3Q5SZD4 288 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 ZNF324BQ6AW86 544 aaPredicted RBP8.93□□□□□ -0.98
HERC4-207ENST00000460168 HIST3H2BBQ8N257 126 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 COMMD1Q8N668 190 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 TMEM185AQ8NFB2 350 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 OR2AE1Q8NHA4 323 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 RNASEH2CQ8TDP1 164 aaKnown RBP8.93□□□□□ -0.98
HERC4-207ENST00000460168 TOMM40LQ969M1 308 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 SPSB4Q96A44 273 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 REEP6Q96HR9 211 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 LYZL4Q96KX0 146 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 OR2V2Q96R30 315 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 CGGBP1Q9UFW8 167 aaPredicted RBP8.93□□□□□ -0.98
HERC4-207ENST00000460168 OR5V1Q9UGF6 321 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 RHBDD3Q9Y3P4 386 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 RP1L1Q8IWN7 2480 aaPredicted RBP8.93□□□□□ -0.98
HERC4-207ENST00000460168 C5orf49A4QMS7 147 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 HMSDA8MTL9 139 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 SLC17A2O00624 439 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 TOMM40O96008 361 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 IL2RAP01589 272 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 IGLV3-1P01715 115 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 IGHV1-2P23083 117 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 HTR2CP28335 458 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 CEACAM3P40198 252 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 RAG2P55895 527 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 HERPUD1Q15011 391 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 TAF9Q16594 264 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 KRTAP27-1Q3LI81 207 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 KHDC3LQ587J8 217 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 COL5A1-AS1Q5SY13 56 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 RTL6Q6ICC9 239 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 Q8N402 240 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 OR51D1Q8NGF3 324 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 OR5L1Q8NGL2 311 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 OR14K1Q8NGZ2 314 aa8.93□□□□□ -0.98
HERC4-207ENST00000460168 FAM57AQ8TBR7 257 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms