RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 Q9H8V8 135 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 RNF121Q9H920 327 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 TXNRD2Q9NNW7 524 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 TAS2R16Q9NYV7 291 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 TECRQ9NZ01 308 aaKnown RBP4.56□□□□□ -1.68
VPS41-209ENST00000457055 NAT8Q9UHE5 227 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 NAT8BQ9UHF3 227 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 LAMTOR2Q9Y2Q5 125 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 PPP2R2CQ9Y2T4 447 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 CARHSP1Q9Y2V2 147 aaKnown RBP4.56□□□□□ -1.68
VPS41-209ENST00000457055 COL4A6Q14031 1691 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 TECTAO75443 2155 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 CHD6Q8TD26 2715 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 DLG5Q8TDM6 1919 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 TRAV36DV7A0A075B6V5 113 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 A0A0G2JLM5 398 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 CEACAM18A8MTB9 384 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 PHOX2AO14813 284 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 ZIC3O60481 467 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 FKBP6O75344 327 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 GCM2O75603 506 aaPredicted RBP4.55□□□□□ -1.68
VPS41-209ENST00000457055 SOX14O95416 240 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 KLF8O95600 359 aaPredicted RBP4.55□□□□□ -1.68
VPS41-209ENST00000457055 CLIC3O95833 236 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 HRH1P35367 487 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 OPRD1P41143 372 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 CYP2J2P51589 502 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 VAMP7P51809 220 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 HILS1P60008 231 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 RPS4XP62701 263 aaKnown RBP4.55□□□□□ -1.68
VPS41-209ENST00000457055 RPS28P62857 69 aaKnown RBP4.55□□□□□ -1.68
VPS41-209ENST00000457055 EIF5AP63241 154 aaKnown RBP4.55□□□□□ -1.68
VPS41-209ENST00000457055 RHOGP84095 191 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 SMAGPQ0VAQ4 97 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 UNC119Q13432 240 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 MORN2Q502X0 79 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 UNC50Q53HI1 259 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 FAM74A1Q5RGS3 127 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 ZNF343Q6P1L6 599 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 TMEM64Q6YI46 380 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 SLC25A48Q6ZT89 311 aaKnown RBP4.55□□□□□ -1.68
VPS41-209ENST00000457055 FAM231DQ6ZW35 169 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 GTF2H5Q6ZYL4 71 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 CALHM3Q86XJ0 350 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 PGBD5Q8N414 524 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 ZNF740Q8NDX6 193 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 OR5A1Q8NGJ0 315 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 OR51Q1Q8NH59 317 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 RDH11Q8TC12 318 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 SLC35E1Q96K37 410 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 FRG2BQ96QU4 278 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 F2RL3Q96RI0 385 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 NDFIP1Q9BT67 221 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 SLC17A9Q9BYT1 436 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 REG4Q9BYZ8 158 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 SLC25A39Q9BZJ4 359 aaPredicted RBP4.55□□□□□ -1.68
VPS41-209ENST00000457055 ZNF442Q9H7R0 627 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 NANOGQ9H9S0 305 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 POPDC3Q9HBV1 291 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 GPR84Q9NQS5 396 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 COMMD9Q9P000 198 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 CES1P1Q9UKY3 287 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 MCTS1Q9ULC4 181 aaKnown RBP4.55□□□□□ -1.68
VPS41-209ENST00000457055 SLC7A7Q9UM01 511 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.55□□□□□ -1.68
VPS41-209ENST00000457055 LOXL2Q9Y4K0 774 aa4.55□□□□□ -1.68
VPS41-209ENST00000457055 SETXQ7Z333 2677 aaKnown RBP4.55□□□□□ -1.68
VPS41-209ENST00000457055 FASNP49327 2511 aaKnown RBP4.54□□□□□ -1.68
VPS41-209ENST00000457055 TRANK1O15050 2925 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 IQCMA0A1B0GVH7 501 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 FOXI3A8MTJ6 420 aaPredicted RBP4.54□□□□□ -1.68
VPS41-209ENST00000457055 F5H697 171 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 INMT-MINDY4F8WBC2 141 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 J3QR89 54 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 PDCD5O14737 125 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 SPRY2O43597 315 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 CLDN11O75508 207 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 RENP00797 406 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 NRASP01111 189 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 APOC3P02656 99 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 ZSCAN5DPP0CG00 497 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 TFPIP10646 304 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 CD99P14209 185 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 CREB1P16220 341 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 ZNF14P17017 642 aaPredicted RBP4.54□□□□□ -1.68
VPS41-209ENST00000457055 GPX3P22352 226 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 EVI2AP22794 236 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 EDNRAP25101 427 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 SFTPDP35247 375 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 SOX3P41225 446 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 GNG4P50150 75 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 GZMMP51124 257 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 PGGT1BP53609 377 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 TMBIM6P55061 237 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 DLX1P56177 255 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 FKBP3Q00688 224 aaKnown RBP4.54□□□□□ -1.68
VPS41-209ENST00000457055 RAB40BQ12829 278 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 GAGE2BQ13066 116 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 RUNX3Q13761 415 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms