RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 BEX2Q9BXY8 128 aa13.51□□□□□ -0.25
TMEM220-202ENST00000455996 LIME1Q9H400 295 aa13.51□□□□□ -0.25
TMEM220-202ENST00000455996 NCOR1P1Q9H4R4 102 aa13.51□□□□□ -0.25
TMEM220-202ENST00000455996 BEX1Q9HBH7 125 aa13.51□□□□□ -0.25
TMEM220-202ENST00000455996 GPN1Q9HCN4 374 aaPredicted RBP13.51□□□□□ -0.25
TMEM220-202ENST00000455996 CBLN4Q9NTU7 201 aa13.51□□□□□ -0.25
TMEM220-202ENST00000455996 KLF2Q9Y5W3 355 aaPredicted RBP13.51□□□□□ -0.25
TMEM220-202ENST00000455996 IGHV3OR15-7A0A075B7D8 119 aa13.5□□□□□ -0.25
TMEM220-202ENST00000455996 OOEPA6NGQ2 149 aa13.5□□□□□ -0.25
TMEM220-202ENST00000455996 NPIPB11E5RHQ5 1161 aa13.5□□□□□ -0.25
TMEM220-202ENST00000455996 LGALS8O00214 317 aa13.5□□□□□ -0.25
TMEM220-202ENST00000455996 SCTP09683 121 aa13.5□□□□□ -0.25
TMEM220-202ENST00000455996 RCC1P18754 421 aaPredicted RBP13.5□□□□□ -0.25
TMEM220-202ENST00000455996 UBE2MP61081 183 aaKnown RBP13.5□□□□□ -0.25
TMEM220-202ENST00000455996 ATXN7L3Q14CW9 347 aaPredicted RBP13.5□□□□□ -0.25
TMEM220-202ENST00000455996 HERPUD1Q15011 391 aa13.5□□□□□ -0.25
TMEM220-202ENST00000455996 HMGN3Q15651 99 aa13.5□□□□□ -0.25
TMEM220-202ENST00000455996 OR5T2Q8NGG2 359 aa13.5□□□□□ -0.25
TMEM220-202ENST00000455996 PPP1R35Q8TAP8 253 aa13.5□□□□□ -0.25
TMEM220-202ENST00000455996 MARCH1Q8TCQ1 289 aa13.5□□□□□ -0.25
TMEM220-202ENST00000455996 SEC22CQ9BRL7 303 aa13.5□□□□□ -0.25
TMEM220-202ENST00000455996 DOPEY1Q5JWR5 2465 aa13.5□□□□□ -0.25
TMEM220-202ENST00000455996 CACNA1DQ01668 2161 aa13.5□□□□□ -0.25
TMEM220-202ENST00000455996 PKDREJQ9NTG1 2253 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 IGKV1-6A0A0C4DH72 117 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 K7N7A8 449 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 MGST3O14880 152 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 TUSC2O75896 110 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 CD8AP01732 235 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 TFF1P04155 84 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 OR4E1P0C645 316 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 DANCRP0C864 163 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 GLP1RP43220 463 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 NPY4RP50391 375 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 UCP3P55916 312 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 TAS2R31P59538 309 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 DHODHQ02127 395 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 IGSF11Q5DX21 431 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 FAM201AQ5SY85 155 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 ZNF788Q6ZQV5 615 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 ZNF561Q8N587 486 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 MOB3AQ96BX8 217 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 ST6GAL2Q96JF0 529 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 DNTTIP1Q9H147 329 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 MED28Q9H204 178 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 TMEM106BQ9NUM4 274 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 DCAF16Q9NXF7 216 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 PCDHB10Q9UN67 800 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 MAB21L2Q9Y586 359 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 ARFGEF3Q5TH69 2177 aa13.49□□□□□ -0.25
TMEM220-202ENST00000455996 TRBV6-7A0A0A0MS04 114 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 TRAV38-1A0A0B4J264 116 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 A0A1W2PPR1 153 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 A6NNC1 897 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 TNFRSF13BO14836 293 aaPredicted RBP13.48□□□□□ -0.25
TMEM220-202ENST00000455996 CREBL2O60519 120 aaPredicted RBP13.48□□□□□ -0.25
TMEM220-202ENST00000455996 CCNKO75909 580 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 FSTL3O95633 263 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 ZBTB25P24278 435 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 SEC61A1P61619 476 aaKnown RBP13.48□□□□□ -0.25
TMEM220-202ENST00000455996 AESQ08117 197 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 CD300CQ08708 224 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 CBX3Q13185 183 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 ASCC1Q8N9N2 400 aaKnown RBP13.48□□□□□ -0.25
TMEM220-202ENST00000455996 ZNF431Q8TF32 576 aaPredicted RBP13.48□□□□□ -0.25
TMEM220-202ENST00000455996 CAPSLQ8WWF8 208 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 GAFA1Q96PS6 74 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 RTBDNQ9BSG5 229 aaPredicted RBP13.48□□□□□ -0.25
TMEM220-202ENST00000455996 FXYD6Q9H0Q3 95 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 FAM234AQ9H0X4 552 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 C5orf66Q9H5L9 145 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 KIF25Q9UIL4 384 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 TRAPPC2LQ9UL33 140 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 ZNF462Q96JM2 2506 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 ABCA4P78363 2273 aa13.48□□□□□ -0.25
TMEM220-202ENST00000455996 IGHV1-69-2A0A0G2JMI3 117 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 TK1P04183 234 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 CTSDP07339 412 aaPredicted RBP13.47□□□□□ -0.25
TMEM220-202ENST00000455996 SULT1A3P0DMM9 295 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 SULT1A4P0DMN0 295 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 FCGR2CP31995 323 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 GABRA2P47869 451 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 FCN2Q15485 313 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 CR1LQ2VPA4 569 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 KRBOX4Q5JUW0 171 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 MEX3BQ6ZN04 569 aaKnown RBP13.47□□□□□ -0.25
TMEM220-202ENST00000455996 TMED4Q7Z7H5 227 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 ADAD2Q8NCV1 583 aaKnown RBP13.47□□□□□ -0.25
TMEM220-202ENST00000455996 OR5D13Q8NGL4 314 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 SPOCK3Q9BQ16 436 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 TRAF4Q9BUZ4 470 aaPredicted RBP13.47□□□□□ -0.25
TMEM220-202ENST00000455996 ZNF665Q9H7R5 613 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 OPN4Q9UHM6 478 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 PPIAL4EA0A075B759 164 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 PPIAL4DF5H284 164 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 SIGLEC5O15389 551 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 PPYP01298 95 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 SOD3P08294 240 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 RNF224P0DH78 156 aa13.47□□□□□ -0.25
TMEM220-202ENST00000455996 PPIAL4FP0DN26 164 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms