RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 ACOT12Q8WYK0 555 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 AP3S1Q92572 193 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 CORO2AQ92828 525 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 FAM46BQ96A09 425 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 SLC25A46Q96AG3 418 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 UPRTQ96BW1 309 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 WDFY2Q96P53 400 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 SMR3AQ99954 134 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 PPA2Q9H2U2 334 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 GAL3ST2Q9H3Q3 398 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 RIMS4Q9H426 269 aaPredicted RBP7.18□□□□□ -1.26
COL28A1-205ENST00000453441 BANF2Q9H503 90 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 METTL8Q9H825 291 aaKnown RBP7.18□□□□□ -1.26
COL28A1-205ENST00000453441 UNKLQ9H9P5 680 aaKnown RBP7.18□□□□□ -1.26
COL28A1-205ENST00000453441 MMP26Q9NRE1 261 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 TAS2R3Q9NYW6 316 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 DAPK2Q9UIK4 370 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 HSF4Q9ULV5 492 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 A0A0A6YYH2 397 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 TMEM272A0A1B0GTI8 110 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 A0A1W2PP11 408 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 TMEM30CPA0ZSE6 113 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 A6NJ64 397 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 TOX4O94842 621 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 PRTN3P24158 256 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 SERPINB10P48595 397 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 MXD1Q05195 221 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 EDDM3AQ14507 147 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 CTF1Q16619 201 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 TMEM30BQ3MIR4 351 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 GPR107Q5VW38 600 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 TMEM200BQ69YZ2 307 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 TRAT1Q6PIZ9 186 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 ZNF554Q86TJ5 538 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 NR2C2APQ86WQ0 139 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 CLVS1Q8IUQ0 354 aaPredicted RBP7.17□□□□□ -1.26
COL28A1-205ENST00000453441 ZNF565Q8N9K5 539 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 OR10A7Q8NGE5 316 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 NEK7Q8TDX7 302 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 CMTM3Q96MX0 182 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 ZNF714Q96N38 554 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 NKX3-1Q99801 234 aaPredicted RBP7.17□□□□□ -1.26
COL28A1-205ENST00000453441 BEX2Q9BXY8 128 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 CHST6Q9GZX3 395 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 SIRPDQ9H106 197 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 LPAR5Q9H1C0 372 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 C19orf12Q9NSK7 152 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 ONECUT1Q9UBC0 465 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 OPN4Q9UHM6 478 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 PEX16Q9Y5Y5 336 aa7.17□□□□□ -1.26
COL28A1-205ENST00000453441 ANK3Q12955 4377 aaKnown RBP7.16□□□□□ -1.26
COL28A1-205ENST00000453441 ZNF729A6NN14 1252 aaPredicted RBP7.16□□□□□ -1.26
COL28A1-205ENST00000453441 SERPINE3A8MV23 424 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 C17orf98A8MV24 154 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 ZNF701M0R085 212 aaPredicted RBP7.16□□□□□ -1.26
COL28A1-205ENST00000453441 CRLF1O75462 422 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 FSHBP01225 129 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 TFF1P04155 84 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 ZNF728P0DKX0 622 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 MMP9P14780 707 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 GZMHP20718 246 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 CHATP28329 748 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 BLVRBP30043 206 aaPredicted RBP7.16□□□□□ -1.26
COL28A1-205ENST00000453441 SRP14P37108 136 aaKnown RBP7.16□□□□□ -1.26
COL28A1-205ENST00000453441 RPS19P39019 145 aaKnown RBP7.16□□□□□ -1.26
COL28A1-205ENST00000453441 RORCP51449 518 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 CLDN12P56749 244 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 ERVFRD-1P60508 538 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 VBP1P61758 197 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 NCS1P62166 190 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 LSM3P62310 102 aaKnown RBP7.16□□□□□ -1.26
COL28A1-205ENST00000453441 ATXN7L3Q14CW9 347 aaPredicted RBP7.16□□□□□ -1.26
COL28A1-205ENST00000453441 C6orf183Q5T699 404 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 IDNKQ5T6J7 187 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 GPR157Q5UAW9 335 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 RSBN1Q5VWQ0 802 aaPredicted RBP7.16□□□□□ -1.26
COL28A1-205ENST00000453441 OR52W1Q6IF63 320 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 ZNF497Q6ZNH5 498 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 MOB1BQ7L9L4 216 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 TRAPPC6BQ86SZ2 158 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 GAPTQ8N292 157 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 PHF21AQ96BD5 680 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 COQ2Q96H96 371 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 DCSTAMPQ9H295 470 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 RNF167Q9H6Y7 350 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 HEXA-AS1Q9H8Q6 139 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 PLEKHJ1Q9NW61 149 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 ETAA1Q9NY74 926 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 NDUFA13Q9P0J0 144 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 MGAT4AQ9UM21 535 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 SPATA2Q9UM82 520 aa7.16□□□□□ -1.26
COL28A1-205ENST00000453441 FN1P02751 2386 aaKnown RBP7.16□□□□□ -1.26
COL28A1-205ENST00000453441 MEIKINA0A087WXM9 373 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 TRBV6-6A0A0A6YYG2 114 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 SMIM31A0A1B0GVY4 71 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 FOXI3A8MTJ6 420 aaPredicted RBP7.15□□□□□ -1.26
COL28A1-205ENST00000453441 INAFM1C9JVW0 142 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 ORC5O43913 435 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 CLPXO76031 633 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 FAM157CP0CG43 387 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms