RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 KIR2DS1Q14954 304 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 FAM209BQ5JX69 171 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 ACER2Q5QJU3 275 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 ZNF429Q86V71 674 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 OR10D3Q8NH80 312 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 CPNE4Q96A23 557 aaPredicted RBP16.37■□□□□ 0.21
SDCBP-204ENST00000447182 TOLLIPQ9H0E2 274 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 RNF115Q9Y4L5 304 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 TRAV20A0A0B4J274 112 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 A0A0G2JMM0 328 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 A0A1W2PPB8 328 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 A0A1W2PRS3 328 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 KIR3DP1A8MWS1 328 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 H0Y980 276 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 P04436 131 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 EPHA1P21709 976 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 DLK1P80370 383 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 RNPS1Q15287 305 aaKnown RBP16.37■□□□□ 0.21
SDCBP-204ENST00000447182 ELOBQ15370 118 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 NCMAPQ5T1S8 102 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 AKR1C8PQ5T2L2 129 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 CPEB3Q8NE35 698 aaKnown RBP16.37■□□□□ 0.21
SDCBP-204ENST00000447182 OR10G4Q8NGN3 311 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 CLDND2Q8NHS1 167 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 EDARADDQ8WWZ3 215 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 CLDN23Q96B33 292 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 TVP23CQ96ET8 276 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 ATP5SQ99766 215 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 WSB1Q9Y6I7 421 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 TRAV1-1A0A0B4J248 108 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 CHST1O43916 411 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 CDX1P47902 265 aaPredicted RBP16.36■□□□□ 0.21
SDCBP-204ENST00000447182 RAB2AP61019 212 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 MPV17LQ2QL34 196 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 KHDC3LQ587J8 217 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 LYSMD4Q5XG99 296 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 SLC35E3Q7Z769 313 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 CMTM1Q8IZ96 169 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 CYB561D1Q8N8Q1 229 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 REPIN1Q9BWE0 567 aaKnown RBP16.36■□□□□ 0.21
SDCBP-204ENST00000447182 ATP23Q9Y6H3 246 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 NCKAP5O14513 1909 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 TNRC6BQ9UPQ9 1833 aaKnown RBP16.36■□□□□ 0.21
SDCBP-204ENST00000447182 H0YL77 283 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 CYTIPO60759 359 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 PAX9P55771 341 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 TAS2R30P59541 319 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 BATF2Q8N1L9 274 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 TMEM217Q8N7C4 229 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 IFI44Q8TCB0 444 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 GGACTQ9BVM4 153 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 MMP24Q9Y5R2 645 aa16.36■□□□□ 0.21
SDCBP-204ENST00000447182 ZNF727A8MUV8 499 aa16.35■□□□□ 0.21
SDCBP-204ENST00000447182 FBP1P09467 338 aa16.35■□□□□ 0.21
SDCBP-204ENST00000447182 RUNX1Q01196 453 aa16.35■□□□□ 0.21
SDCBP-204ENST00000447182 OR56B2PQ8NGI1 322 aa16.35■□□□□ 0.21
SDCBP-204ENST00000447182 Q8WTZ3 238 aa16.35■□□□□ 0.21
SDCBP-204ENST00000447182 GTF3AQ92664 365 aaKnown RBP16.35■□□□□ 0.21
SDCBP-204ENST00000447182 TMEM45BQ96B21 275 aa16.35■□□□□ 0.21
SDCBP-204ENST00000447182 NIPSNAP3BQ9BS92 247 aa16.35■□□□□ 0.21
SDCBP-204ENST00000447182 FGF23Q9GZV9 251 aaPredicted RBP16.35■□□□□ 0.21
SDCBP-204ENST00000447182 UBE2ZQ9H832 354 aaPredicted RBP16.35■□□□□ 0.21
SDCBP-204ENST00000447182 CCL28Q9NRJ3 127 aa16.35■□□□□ 0.21
SDCBP-204ENST00000447182 TAAR3PQ9P1P4 343 aa16.35■□□□□ 0.21
SDCBP-204ENST00000447182 TINAGQ9UJW2 476 aa16.35■□□□□ 0.21
SDCBP-204ENST00000447182 MRPS18CQ9Y3D5 142 aaKnown RBP16.35■□□□□ 0.21
SDCBP-204ENST00000447182 PIGBOS1A0A0B4J2F0 54 aa16.34■□□□□ 0.21
SDCBP-204ENST00000447182 IGKV1-6A0A0C4DH72 117 aa16.34■□□□□ 0.21
SDCBP-204ENST00000447182 LRRC3CA6NJW4 275 aa16.34■□□□□ 0.21
SDCBP-204ENST00000447182 WRBO00258 174 aa16.34■□□□□ 0.21
SDCBP-204ENST00000447182 DFFBO76075 338 aa16.34■□□□□ 0.21
SDCBP-204ENST00000447182 SLC25A6P12236 298 aa16.34■□□□□ 0.21
SDCBP-204ENST00000447182 ZNF154Q13106 437 aa16.34■□□□□ 0.21
SDCBP-204ENST00000447182 PRDX4Q13162 271 aa16.34■□□□□ 0.21
SDCBP-204ENST00000447182 HLA-BQ31612 363 aa16.34■□□□□ 0.21
SDCBP-204ENST00000447182 C5orf24Q7Z6I8 188 aa16.34■□□□□ 0.21
SDCBP-204ENST00000447182 RFPL3SP0C7P2 107 aa16.34■□□□□ 0.21
SDCBP-204ENST00000447182 HAAOP46952 286 aa16.34■□□□□ 0.21
SDCBP-204ENST00000447182 GLIPR1P48060 266 aa16.34■□□□□ 0.21
SDCBP-204ENST00000447182 GPHA2Q96T91 129 aa16.34■□□□□ 0.21
SDCBP-204ENST00000447182 CFAP54Q96N23 3096 aa16.33■□□□□ 0.21
SDCBP-204ENST00000447182 IFITM10A6NMD0 228 aa16.33■□□□□ 0.21
SDCBP-204ENST00000447182 B4DEV8 164 aa16.33■□□□□ 0.21
SDCBP-204ENST00000447182 PGLYRP1O75594 196 aaPredicted RBP16.33■□□□□ 0.21
SDCBP-204ENST00000447182 YIF1AO95070 293 aa16.33■□□□□ 0.21
SDCBP-204ENST00000447182 CXCL1P09341 107 aa16.33■□□□□ 0.21
SDCBP-204ENST00000447182 FOLR3P41439 243 aa16.33■□□□□ 0.21
SDCBP-204ENST00000447182 TRA2AQ13595 282 aaKnown RBP eCLIP16.33■□□□□ 0.21
SDCBP-204ENST00000447182 CEACAM21Q3KPI0 293 aa16.33■□□□□ 0.21
SDCBP-204ENST00000447182 ZNF610Q8N9Z0 462 aa16.33■□□□□ 0.21
SDCBP-204ENST00000447182 HS3ST6Q96QI5 342 aa16.33■□□□□ 0.21
SDCBP-204ENST00000447182 RIMS4Q9H426 269 aaPredicted RBP16.33■□□□□ 0.21
SDCBP-204ENST00000447182 DOK5Q9P104 306 aa16.33■□□□□ 0.21
SDCBP-204ENST00000447182 DMRT1Q9Y5R6 373 aa16.33■□□□□ 0.21
SDCBP-204ENST00000447182 TNRC6AQ8NDV7 1962 aaKnown RBP16.33■□□□□ 0.2
SDCBP-204ENST00000447182 CCL4P13236 92 aa16.33■□□□□ 0.2
SDCBP-204ENST00000447182 F2RP25116 425 aa16.33■□□□□ 0.2
SDCBP-204ENST00000447182 ERVFRD-1P60508 538 aa16.33■□□□□ 0.2
SDCBP-204ENST00000447182 RPL23AP62750 156 aaKnown RBP16.33■□□□□ 0.2
SDCBP-204ENST00000447182 STX12Q86Y82 276 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms