RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 GINS1Q14691 196 aa10.72□□□□□ -0.69
LINC00642-202ENST00000442515 ZNF322Q6U7Q0 402 aaPredicted RBP10.72□□□□□ -0.69
LINC00642-202ENST00000442515 PGAM4Q8N0Y7 254 aa10.72□□□□□ -0.69
LINC00642-202ENST00000442515 TMEM104Q8NE00 496 aa10.72□□□□□ -0.69
LINC00642-202ENST00000442515 OR4C12Q96R67 309 aa10.72□□□□□ -0.69
LINC00642-202ENST00000442515 OSBPL10Q9BXB5 764 aa10.72□□□□□ -0.69
LINC00642-202ENST00000442515 COMMD4Q9H0A8 199 aa10.72□□□□□ -0.69
LINC00642-202ENST00000442515 KRT84Q9NSB2 600 aa10.72□□□□□ -0.69
LINC00642-202ENST00000442515 NDE1Q9NXR1 346 aa10.72□□□□□ -0.69
LINC00642-202ENST00000442515 ACTR3BQ9P1U1 418 aa10.72□□□□□ -0.69
LINC00642-202ENST00000442515 ZNF107Q9UII5 783 aaPredicted RBP10.72□□□□□ -0.69
LINC00642-202ENST00000442515 PKHD1P08F94 4074 aa10.72□□□□□ -0.69
LINC00642-202ENST00000442515 KIAA2026Q5HYC2 2103 aa10.72□□□□□ -0.69
LINC00642-202ENST00000442515 IGHV4OR15-8A0A075B7B6 117 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 A0A087WW49 117 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 IGKV1-12A0A0C4DH73 117 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 B2RBV5 119 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 ANKRD65E5RJM6 399 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 GYG2O15488 501 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 MOSP00540 346 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 IGKV1D-12P01611 117 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 IGLV1-40P01703 118 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 GAPDHP04406 335 aaKnown RBP10.71□□□□□ -0.69
LINC00642-202ENST00000442515 RAB9AP51151 201 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 ATP1B3P54709 279 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 F2RL1P55085 397 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 Q6P435 159 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 ARHGAP24Q8N264 748 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 ZNF565Q8N9K5 539 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 TOLLIPQ9H0E2 274 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 LINC00574Q9H8X3 128 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 REEP1Q9H902 201 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 WSB1Q9Y6I7 421 aa10.71□□□□□ -0.69
LINC00642-202ENST00000442515 MEIKINA0A087WXM9 373 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 IGKV1-9A0A0C4DH69 117 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 ZNF736B4DX44 427 aaPredicted RBP10.7□□□□□ -0.7
LINC00642-202ENST00000442515 C12orf77C9JDV5 145 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 NPIPB11E5RHQ5 1161 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 HSPB6O14558 160 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 SERPINA3P01011 423 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 HMGN1P05114 100 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 SLC2A2P11168 524 aaPredicted RBP10.7□□□□□ -0.7
LINC00642-202ENST00000442515 SSTR5P35346 364 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 MTCP1P56278 107 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 CXCR4P61073 352 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 PDZK1IP1Q13113 114 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 CHST4Q8NCG5 386 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 DNAAF1Q8NEP3 725 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 OR8H1Q8NGG4 311 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 OR51T1Q8NGJ9 327 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 RFESDQ8TAC1 157 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 CNN2Q99439 309 aaKnown RBP10.7□□□□□ -0.7
LINC00642-202ENST00000442515 FEVQ99581 238 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 MNTQ99583 582 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 CHCHD6Q9BRQ6 235 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 TPSG1Q9NRR2 321 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 MRM2Q9UI43 246 aaKnown RBP10.7□□□□□ -0.7
LINC00642-202ENST00000442515 KIF25Q9UIL4 384 aa10.7□□□□□ -0.7
LINC00642-202ENST00000442515 FAM90A10PA6NDY2 464 aa10.69□□□□□ -0.7
LINC00642-202ENST00000442515 ATP6V0E1O15342 81 aa10.69□□□□□ -0.7
LINC00642-202ENST00000442515 KDM4BO94953 1096 aa10.69□□□□□ -0.7
LINC00642-202ENST00000442515 RPP14O95059 124 aaKnown RBP10.69□□□□□ -0.7
LINC00642-202ENST00000442515 IGLV1-51P01701 117 aa10.69□□□□□ -0.7
LINC00642-202ENST00000442515 CD1BP29016 333 aa10.69□□□□□ -0.7
LINC00642-202ENST00000442515 C21orf33P30042 268 aaPredicted RBP10.69□□□□□ -0.7
LINC00642-202ENST00000442515 HTR1FP30939 366 aa10.69□□□□□ -0.7
LINC00642-202ENST00000442515 SLC16A12Q6ZSM3 486 aa10.69□□□□□ -0.7
LINC00642-202ENST00000442515 MRGPRDQ8TDS7 321 aa10.69□□□□□ -0.7
LINC00642-202ENST00000442515 RFT1Q96AA3 541 aa10.69□□□□□ -0.7
LINC00642-202ENST00000442515 RSRP1Q9BUV0 290 aa10.69□□□□□ -0.7
LINC00642-202ENST00000442515 HIPK2Q9H2X6 1198 aa10.69□□□□□ -0.7
LINC00642-202ENST00000442515 STUB1Q9UNE7 303 aa10.69□□□□□ -0.7
LINC00642-202ENST00000442515 DNAH2Q9P225 4427 aa10.69□□□□□ -0.7
LINC00642-202ENST00000442515 FAT2Q9NYQ8 4349 aa10.69□□□□□ -0.7
LINC00642-202ENST00000442515 DEGS1O15121 323 aa10.68□□□□□ -0.7
LINC00642-202ENST00000442515 LGALS1P09382 135 aaKnown RBP10.68□□□□□ -0.7
LINC00642-202ENST00000442515 ATP6V1B2P21281 511 aa10.68□□□□□ -0.7
LINC00642-202ENST00000442515 ACTR3P61158 418 aa10.68□□□□□ -0.7
LINC00642-202ENST00000442515 CDK5Q00535 292 aa10.68□□□□□ -0.7
LINC00642-202ENST00000442515 RNLSQ5VYX0 342 aa10.68□□□□□ -0.7
LINC00642-202ENST00000442515 OR2T5Q6IEZ7 315 aa10.68□□□□□ -0.7
LINC00642-202ENST00000442515 CYP2R1Q6VVX0 501 aa10.68□□□□□ -0.7
LINC00642-202ENST00000442515 ANKRD13BQ86YJ7 626 aa10.68□□□□□ -0.7
LINC00642-202ENST00000442515 OR2T29Q8NH02 315 aa10.68□□□□□ -0.7
LINC00642-202ENST00000442515 GATAD1Q8WUU5 269 aa10.68□□□□□ -0.7
LINC00642-202ENST00000442515 RTN4IP1Q8WWV3 396 aaPredicted RBP10.68□□□□□ -0.7
LINC00642-202ENST00000442515 PP6455Q8WZ26 134 aa10.68□□□□□ -0.7
LINC00642-202ENST00000442515 TMED9Q9BVK6 235 aa10.68□□□□□ -0.7
LINC00642-202ENST00000442515 TUBA4BQ9H853 241 aa10.68□□□□□ -0.7
LINC00642-202ENST00000442515 PARP11Q9NR21 331 aa10.68□□□□□ -0.7
LINC00642-202ENST00000442515 MRPS28Q9Y2Q9 187 aaKnown RBP10.68□□□□□ -0.7
LINC00642-202ENST00000442515 DNAH6Q9C0G6 4158 aa10.68□□□□□ -0.7
LINC00642-202ENST00000442515 DNAH11Q96DT5 4516 aa10.67□□□□□ -0.7
LINC00642-202ENST00000442515 TRAV41A0A0B4J266 112 aa10.67□□□□□ -0.7
LINC00642-202ENST00000442515 GALEQ14376 348 aa10.67□□□□□ -0.7
LINC00642-202ENST00000442515 CDK5R1Q15078 307 aa10.67□□□□□ -0.7
LINC00642-202ENST00000442515 SLC35F2Q8IXU6 374 aa10.67□□□□□ -0.7
LINC00642-202ENST00000442515 RPP25LQ8N5L8 163 aaKnown RBP10.67□□□□□ -0.7
LINC00642-202ENST00000442515 OR10A7Q8NGE5 316 aa10.67□□□□□ -0.7
LINC00642-202ENST00000442515 OR5D18Q8NGL1 313 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms