RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 KIF25Q9UIL4 384 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 KBTBD11-OT1A0A1B0GTJ5 212 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 MDFIC2A0A1B0GVS7 189 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 SHISA3A0PJX4 238 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 DNAJC9-AS1A6NH13 148 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 IFITM5A6NNB3 132 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 PDCD6O75340 191 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 CA11O75493 328 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 PAHP00439 452 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 CGB3P0DN86 165 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 CGB7P0DN87 165 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 CD36P16671 472 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 JUNBP17275 347 aaPredicted RBP9.63□□□□□ -0.87
HSPG2-206ENST00000439717 COX7A1P24310 79 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 LGALS4P56470 323 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 UBA52P62987 128 aaKnown RBP9.63□□□□□ -0.87
HSPG2-206ENST00000439717 SRSF2Q01130 221 aaKnown RBP9.63□□□□□ -0.87
HSPG2-206ENST00000439717 UNC119Q13432 240 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 P2RY14Q15391 338 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 SLC9A3R2Q15599 337 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 OR10K2Q6IF99 312 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 ZNF782Q6ZMW2 699 aaPredicted RBP9.63□□□□□ -0.87
HSPG2-206ENST00000439717 ZNF497Q6ZNH5 498 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 RTN4RL2Q86UN3 420 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 TPRA1Q86W33 373 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 PNKDQ8N490 385 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 NEK7Q8TDX7 302 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 MDFIQ99750 246 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 URM1Q9BTM9 101 aaKnown RBP9.63□□□□□ -0.87
HSPG2-206ENST00000439717 OR51E2Q9H255 320 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 TMEM133Q9H2Q1 129 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 LINC00574Q9H8X3 128 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 PEX16Q9Y5Y5 336 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 POMT1Q9Y6A1 747 aa9.63□□□□□ -0.87
HSPG2-206ENST00000439717 DSCAML1Q8TD84 2053 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 A0A1W2PRD5 423 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 A0A1W2PRF3 423 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 A0A1W2PRM7 423 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 ODF3BA8MYP8 253 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 AIPO00170 330 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 HOXA3O43365 443 aaPredicted RBP9.62□□□□□ -0.87
HSPG2-206ENST00000439717 MT-ND4P03905 459 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 RNASE1P07998 156 aaKnown RBP9.62□□□□□ -0.87
HSPG2-206ENST00000439717 MELTFP08582 738 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 GZMHP20718 246 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 CDK2P24941 298 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 GLP1RP43220 463 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 OR10A3P58181 314 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 C17orf58Q2M2W7 97 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 C2orf76Q3KRA6 126 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 TIMM50Q3ZCQ8 353 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 ZNF626Q68DY1 528 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 SIGIRRQ6IA17 410 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 BRICD5Q6PL45 260 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 GDPGP1Q6ZNW5 385 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 GAPTQ8N292 157 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 OR10A7Q8NGE5 316 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 OR51D1Q8NGF3 324 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 OR13A1Q8NGR1 328 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 SSMEM1Q8WWF3 244 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 FAM3DQ96BQ1 224 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 KCTD7Q96MP8 289 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 NEDD4LQ96PU5 975 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 CHCHD6Q9BRQ6 235 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 C19orf24Q9BVV8 132 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 CLEC7AQ9BXN2 247 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 DPAGT1Q9H3H5 408 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 ETAA1Q9NY74 926 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 CALYQ9NYX4 217 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 ZNRD1Q9P1U0 126 aa9.62□□□□□ -0.87
HSPG2-206ENST00000439717 TBL2Q9Y4P3 447 aaKnown RBP9.62□□□□□ -0.87
HSPG2-206ENST00000439717 ATRQ13535 2644 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 A0A087X0M5 115 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 IGHV2-26A0A0B4J1V2 119 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 A0A1B0GX30 115 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 NOTOA8MTQ0 251 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 NPIPB11E5RHQ5 1161 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 LDLRAD4O15165 306 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 ORC5O43913 435 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 MMP23AO75900 390 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 IL1AP01583 271 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 ARG1P05089 322 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 GADD45AP24522 165 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 CHATP28329 748 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 CD34P28906 385 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 IER3P46695 156 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 CLDN12P56749 244 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 FAM189A2Q15884 450 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 AANATQ16613 207 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 HES5Q5TA89 166 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 MINOS1Q5TGZ0 78 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 PRAMEF5Q5TYX0 476 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 FAM89BQ8N5H3 189 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 BEND2Q8NDZ0 799 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 MRGPRDQ8TDS7 321 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 YIPF6Q96EC8 236 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 LPAR5Q9H1C0 372 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 MEGF9Q9H1U4 602 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 KCNK15Q9H427 330 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 RAB9BQ9NP90 201 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms