RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 A0A1W2PPE2 198 aa14.37□□□□□ -0.11
TTC3-209ENST00000438055 IGSF23A1L1A6 192 aa14.37□□□□□ -0.11
TTC3-209ENST00000438055 CHST1O43916 411 aa14.37□□□□□ -0.11
TTC3-209ENST00000438055 H2AFB1P0C5Y9 115 aa14.37□□□□□ -0.11
TTC3-209ENST00000438055 ALKBH2Q6NS38 261 aa14.37□□□□□ -0.11
TTC3-209ENST00000438055 DMBX1Q8NFW5 382 aa14.37□□□□□ -0.11
TTC3-209ENST00000438055 RSRP1Q9BUV0 290 aa14.37□□□□□ -0.11
TTC3-209ENST00000438055 PLEKHF2Q9H8W4 249 aa14.37□□□□□ -0.11
TTC3-209ENST00000438055 ZDHHC8Q9ULC8 765 aa14.37□□□□□ -0.11
TTC3-209ENST00000438055 DOCK10Q96BY6 2186 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 B4E171 279 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 SIRPB1O00241 398 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 TSPAN7P41732 249 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 DYNLT3P51808 116 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 ZNF154Q13106 437 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 ASCL4Q6XD76 172 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 FAM185AQ8N0U4 392 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 TMEM252Q8N6L7 170 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 HPSE2Q8WWQ2 592 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 BOD1Q96IK1 185 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 IL36GQ9NZH8 169 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 PPP1R3CQ9UQK1 317 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 ADAMTS20P59510 1910 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 CDS2O95674 445 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 FGF12P61328 243 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 TAAR9Q96RI9 348 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 SLC35B3Q9H1N7 401 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 Q9N2K0 584 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 COL6A3P12111 3177 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 SLC22A20A6NK97 555 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 PTAFRP25105 342 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 UCP3P55916 312 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 ZXDAP98168 799 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 Q6ZSR3 168 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 STX12Q86Y82 276 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 URGCP-MRPS24S4R325 110 aa14.36□□□□□ -0.11
TTC3-209ENST00000438055 RAB5CP51148 216 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 GFRA1P56159 465 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 FOXO1Q12778 655 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 CEACAM21Q3KPI0 293 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 Q6ZPA2 131 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 GINS3Q9BRX5 216 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 REPIN1Q9BWE0 567 aaKnown RBP14.35□□□□□ -0.11
TTC3-209ENST00000438055 TTTY12Q9BZ98 90 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 OR14J1Q9UGF5 321 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 GVINP1Q7Z2Y8 2422 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 DEGS1O15121 323 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 WDR1O75083 606 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 IFNA5P01569 189 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 IAPPP10997 89 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 HOXA1P49639 335 aaPredicted RBP14.35□□□□□ -0.11
TTC3-209ENST00000438055 EIF2S3LQ2VIR3 472 aaKnown RBP14.35□□□□□ -0.11
TTC3-209ENST00000438055 ZNF528Q3MIS6 628 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 SELENOHQ8IZQ5 122 aaKnown RBP14.35□□□□□ -0.11
TTC3-209ENST00000438055 FOXJ2Q9P0K8 574 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 MED13Q9UHV7 2174 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 TRAPPC2LQ9UL33 140 aa14.35□□□□□ -0.11
TTC3-209ENST00000438055 TERTO14746 1132 aaKnown RBP14.35□□□□□ -0.11
TTC3-209ENST00000438055 COLCA2A8K830 154 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 ZNF724A8MTY0 619 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 TMEM267Q0VDI3 215 aaPredicted RBP14.34□□□□□ -0.11
TTC3-209ENST00000438055 THNSL2Q86YJ6 484 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 COMMD1Q8N668 190 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 TMEM251Q8N6I4 163 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 LRTM2Q8N967 370 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 HIST1H2BAQ96A08 127 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 NTNG2Q96CW9 530 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 ZNF703Q9H7S9 590 aaPredicted RBP14.34□□□□□ -0.11
TTC3-209ENST00000438055 ZNF503-AS2A6NEH8 195 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 VDAC1P21796 283 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 RAB2AP61019 212 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 NUFIP2Q7Z417 695 aaKnown RBP14.34□□□□□ -0.11
TTC3-209ENST00000438055 PRSS50Q9UI38 385 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 LIPGQ9Y5X9 500 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 PQLC2LA1A4F0 135 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 NDUFA2O43678 99 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 NEURL1O76050 574 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 RPS10P46783 165 aaKnown RBP14.34□□□□□ -0.11
TTC3-209ENST00000438055 FAM58AQ8N1B3 248 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 C15orf54Q8N8G6 183 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 OR4D5Q8NGN0 318 aa14.34□□□□□ -0.11
TTC3-209ENST00000438055 USB1Q9BQ65 265 aaKnown RBP14.34□□□□□ -0.11
TTC3-209ENST00000438055 COLQQ9Y215 455 aaPredicted RBP14.34□□□□□ -0.11
TTC3-209ENST00000438055 TMEM265A0A087WTH1 108 aa14.33□□□□□ -0.11
TTC3-209ENST00000438055 TXNL1O43396 289 aa14.33□□□□□ -0.11
TTC3-209ENST00000438055 LILRA1O75019 489 aa14.33□□□□□ -0.11
TTC3-209ENST00000438055 RBMXL2O75526 392 aaKnown RBP14.33□□□□□ -0.11
TTC3-209ENST00000438055 ARR3P36575 388 aa14.33□□□□□ -0.11
TTC3-209ENST00000438055 MPLP40238 635 aa14.33□□□□□ -0.11
TTC3-209ENST00000438055 CCL20P78556 96 aa14.33□□□□□ -0.11
TTC3-209ENST00000438055 OR1J1Q8NGS3 322 aa14.33□□□□□ -0.11
TTC3-209ENST00000438055 MMP24Q9Y5R2 645 aa14.33□□□□□ -0.11
TTC3-209ENST00000438055 SULT1A1P50225 295 aa14.33□□□□□ -0.12
TTC3-209ENST00000438055 LHX2P50458 406 aa14.33□□□□□ -0.12
TTC3-209ENST00000438055 ZNF573Q86YE8 665 aa14.33□□□□□ -0.12
TTC3-209ENST00000438055 LFNGQ8NES3 379 aa14.33□□□□□ -0.12
TTC3-209ENST00000438055 SCGB1C1Q8TD33 95 aa14.33□□□□□ -0.12
TTC3-209ENST00000438055 CTXN2P0C2S0 81 aa14.33□□□□□ -0.12
TTC3-209ENST00000438055 IDH3GP51553 393 aaPredicted RBP14.33□□□□□ -0.12
TTC3-209ENST00000438055 UBE2KP61086 200 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms