RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 DAPK2Q9UIK4 370 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 TRAPPC2LQ9UL33 140 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 TRAV39A0A0B4J263 110 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 MDFIC2A0A1B0GVS7 189 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 ZNF729A6NN14 1252 aaPredicted RBP12.7□□□□□ -0.38
TREX1-201ENST00000433541 NOTOA8MTQ0 251 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 C17orf98A8MV24 154 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 TMEM14DPA8MWL7 114 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 RBP4P02753 201 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 SMIM18P0DKX4 95 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 SLC2A2P11168 524 aaPredicted RBP12.7□□□□□ -0.38
TREX1-201ENST00000433541 OMGP23515 440 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 CDK2P24941 298 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 UBE2E1P51965 193 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 BAMBIQ13145 260 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 LTC4SQ16873 150 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 RSBN1Q5VWQ0 802 aaPredicted RBP12.7□□□□□ -0.38
TREX1-201ENST00000433541 SLC35E4Q6ICL7 350 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 GDPGP1Q6ZNW5 385 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 TCF23Q7RTU1 214 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 YIPF6Q96EC8 236 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 TNFRSF19Q9NS68 423 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 TAS2R3Q9NYW6 316 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 SOX21Q9Y651 276 aaPredicted RBP12.7□□□□□ -0.38
TREX1-201ENST00000433541 SESN1Q9Y6P5 492 aa12.7□□□□□ -0.38
TREX1-201ENST00000433541 A0A0B4J203 849 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 TMEM272A0A1B0GTI8 110 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 FAM172BPA6NC97 362 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 TRIM64CA6NLI5 447 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 ARG1P05089 322 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 SAA4P35542 130 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 VEGFCP49767 419 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 DLX6P56179 175 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 DEFB112Q30KQ8 113 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 OR52W1Q6IF63 320 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 OR13A1Q8NGR1 328 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 OR4K15Q8NH41 348 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 DYRK2Q92630 601 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 DUX5Q96PT3 197 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 FUNDC2Q9BWH2 189 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 UNKLQ9H9P5 680 aaKnown RBP12.69□□□□□ -0.38
TREX1-201ENST00000433541 CALYQ9NYX4 217 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 RCC2Q9P258 522 aaKnown RBP12.69□□□□□ -0.38
TREX1-201ENST00000433541 RAB22AQ9UL26 194 aa12.69□□□□□ -0.38
TREX1-201ENST00000433541 A0A0A6YYJ9 748 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 A0A0U1RQK1 487 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 FBP1P09467 338 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 CLEC2LP0C7M8 214 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 CD37P11049 281 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 HILS1P60008 231 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 MRPS15P82914 257 aaKnown RBP12.68□□□□□ -0.38
TREX1-201ENST00000433541 FAM189A2Q15884 450 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 IDNKQ5T6J7 187 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 SFXN4Q6P4A7 337 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 C9orf139Q6ZV77 190 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 C6orf201Q7Z4U5 140 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 GPR141Q7Z602 305 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 PRR18Q8N4B5 295 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 OR56B1Q8NGI3 324 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 SETD6Q8TBK2 473 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 CORO2AQ92828 525 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 TNFRSF14Q92956 283 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 TM2D1Q9BX74 207 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 LPAR5Q9H1C0 372 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 TMEM133Q9H2Q1 129 aa12.68□□□□□ -0.38
TREX1-201ENST00000433541 KBTBD11-OT1A0A1B0GTJ5 212 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 METTL21EPA6NDL7 271 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 BTBD17A6NE02 478 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 TRIM77I1YAP6 450 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 TOR1AO14656 332 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 SOCS1O15524 211 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 GLAP06280 429 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 CHATP28329 748 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 SSTR5P35346 364 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 TGFBR1P36897 503 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 QRFPP83859 136 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 SIGIRRQ6IA17 410 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 HEPN1Q6WQI6 88 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 ZNF497Q6ZNH5 498 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 USP43Q70EL4 1123 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 NR2C2APQ86WQ0 139 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 PIP4P2Q8N4L2 257 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 C11orf42Q8N5U0 333 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 OR13F1Q8NGS4 319 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 RFESDQ8TAC1 157 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 NDNFQ8TB73 568 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 ARL11Q969Q4 196 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 PHF21AQ96BD5 680 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 SULT4A1Q9BR01 284 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 FAAP24Q9BTP7 215 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 CLEC7AQ9BXN2 247 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 ATG5Q9H1Y0 275 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 RAB9BQ9NP90 201 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 KCNIP1Q9NZI2 227 aa12.67□□□□□ -0.38
TREX1-201ENST00000433541 A0A075B6Q4 140 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 IGHV2-26A0A0B4J1V2 119 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 DNAJC9-AS1A6NH13 148 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 RNF212BA8MTL3 300 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 CA11O75493 328 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 MMP23AO75900 390 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms