RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 HIST1H4AP62805 103 aaKnown RBP6.94□□□□□ -1.3
LINC00649-203ENST00000427447 TMEM255AQ5JRV8 349 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 SLC16A11Q8NCK7 471 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 INSIG2Q9Y5U4 225 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 DENND4AQ7Z401 1863 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 CASP8AP2Q9UKL3 1982 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 LOC105371242A0A075B767 164 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 PPIAL4CA0A0B4J2A2 164 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 BLACEA4D250 179 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 TSPAN2O60636 221 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 PPIAL4GP0DN37 164 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 VEGFAP15692 232 aaPredicted RBP6.94□□□□□ -1.3
LINC00649-203ENST00000427447 GSG1Q2KHT4 349 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 DOK3Q7L591 496 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 TRAV1-2A0A0B4J238 106 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 DLX6P56179 175 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 INHBEP58166 350 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 SMAD2Q15796 467 aaKnown RBP6.94□□□□□ -1.3
LINC00649-203ENST00000427447 C1orf194Q5T5A4 169 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 GPR132Q9UNW8 380 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 COL14A1Q05707 1796 aaKnown RBP6.94□□□□□ -1.3
LINC00649-203ENST00000427447 K7N7A8 449 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 NAPSAO96009 420 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 ALOX5APP20292 161 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 ASIPP42127 132 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 C1orf195Q5TG92 126 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 PLPPR1Q8TBJ4 325 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 TTTY10Q9BZA0 68 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 FAM240AA0A1B0GVK7 77 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 ZNF593O00488 134 aaPredicted RBP6.94□□□□□ -1.3
LINC00649-203ENST00000427447 IGHA1P01876 353 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 FUT3P21217 361 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 GPX4P36969 197 aaPredicted RBP6.94□□□□□ -1.3
LINC00649-203ENST00000427447 HERV-K104P63124 156 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 ZNF678Q5SXM1 525 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 TMEM190Q8WZ59 177 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 LINC00470Q9BZP3 86 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 ENTPD2Q9Y5L3 495 aa6.94□□□□□ -1.3
LINC00649-203ENST00000427447 MED12LQ86YW9 2145 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 SPINT2O43291 252 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 CFDP00746 253 aaPredicted RBP6.93□□□□□ -1.3
LINC00649-203ENST00000427447 AMY1AP04745 511 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 ABHD17CQ6PCB6 329 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 OR4C3Q8NH37 302 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 FBXO17Q96EF6 278 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 MTFP1Q9UDX5 166 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 ST3GAL6Q9Y274 331 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 BUD23O43709 281 aaKnown RBP6.93□□□□□ -1.3
LINC00649-203ENST00000427447 IL1RNP18510 177 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 COL8A1P27658 744 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 ARSIQ5FYB1 569 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 MRPL18Q9H0U6 180 aaKnown RBP6.93□□□□□ -1.3
LINC00649-203ENST00000427447 ZNF337Q9Y3M9 751 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 CSN3P07498 182 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 Q6ZSR6 202 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 MRGPREQ86SM8 312 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 FER1L6-AS1Q8NA97 138 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 TMEM125Q96AQ2 219 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 SIGLEC11Q96RL6 698 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 SELENOIQ9C0D9 397 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 GPR52Q9Y2T5 361 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 TIAL1Q01085 375 aaKnown RBP eCLIP6.93□□□□□ -1.3
LINC00649-203ENST00000427447 CDCA3Q99618 268 aaPredicted RBP6.93□□□□□ -1.3
LINC00649-203ENST00000427447 B3GAT1Q9P2W7 334 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 DDX60LQ5H9U9 1706 aaKnown RBP6.93□□□□□ -1.3
LINC00649-203ENST00000427447 MFAP2P55001 183 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 CTXN1P60606 82 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 PHLDA2Q53GA4 152 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 SLC39A5Q6ZMH5 540 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 TSACCQ96A04 125 aaPredicted RBP6.93□□□□□ -1.3
LINC00649-203ENST00000427447 PRR14LQ5THK1 2151 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 A4D1N5 150 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 PTGESO14684 152 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 GALR2O43603 387 aaPredicted RBP6.93□□□□□ -1.3
LINC00649-203ENST00000427447 KCNMB1Q16558 191 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 TMEM155Q4W5P6 130 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 AGBL5Q8NDL9 886 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 CADM4Q8NFZ8 388 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 OR4F17Q8NGA8 305 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 KHSRPQ92945 711 aaKnown RBP eCLIP6.93□□□□□ -1.3
LINC00649-203ENST00000427447 PKDCCQ504Y2 493 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 FAM57BQ71RH2 274 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 LDLRAD3Q86YD5 345 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 TAAR6Q96RI8 345 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 ACSS2Q9NR19 701 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 SPATA31A1Q5TZJ5 1347 aa6.93□□□□□ -1.3
LINC00649-203ENST00000427447 LOC107986453A0A1B0GWG9 222 aa6.92□□□□□ -1.3
LINC00649-203ENST00000427447 KBTBD11O94819 623 aa6.92□□□□□ -1.3
LINC00649-203ENST00000427447 CXorf1O96002 111 aa6.92□□□□□ -1.3
LINC00649-203ENST00000427447 STC1P52823 247 aa6.92□□□□□ -1.3
LINC00649-203ENST00000427447 SHISA6Q6ZSJ9 500 aa6.92□□□□□ -1.3
LINC00649-203ENST00000427447 HIST1H2BAQ96A08 127 aa6.92□□□□□ -1.3
LINC00649-203ENST00000427447 GPR146Q96CH1 333 aa6.92□□□□□ -1.3
LINC00649-203ENST00000427447 HES2Q9Y543 173 aa6.92□□□□□ -1.3
LINC00649-203ENST00000427447 PLXNA3P51805 1871 aa6.92□□□□□ -1.3
LINC00649-203ENST00000427447 KCNE1BA0A087WTH5 132 aa6.92□□□□□ -1.3
LINC00649-203ENST00000427447 LINC01549A6NIU2 74 aa6.92□□□□□ -1.3
LINC00649-203ENST00000427447 NPIPB6E9PJ23 425 aa6.92□□□□□ -1.3
LINC00649-203ENST00000427447 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.92□□□□□ -1.3
LINC00649-203ENST00000427447 FAM72AQ5TYM5 149 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms