RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 GLT8D1Q68CQ7 371 aa13.97□□□□□ -0.17
LMCD1-204ENST00000426878 SLC35E4Q6ICL7 350 aa13.97□□□□□ -0.17
LMCD1-204ENST00000426878 LHFPL4Q7Z7J7 247 aa13.97□□□□□ -0.17
LMCD1-204ENST00000426878 RTN4RL2Q86UN3 420 aa13.97□□□□□ -0.17
LMCD1-204ENST00000426878 C3orf56Q8N813 242 aa13.97□□□□□ -0.17
LMCD1-204ENST00000426878 PLPPR1Q8TBJ4 325 aa13.97□□□□□ -0.17
LMCD1-204ENST00000426878 SSX3Q99909 188 aa13.97□□□□□ -0.17
LMCD1-204ENST00000426878 CLEC7AQ9BXN2 247 aa13.97□□□□□ -0.17
LMCD1-204ENST00000426878 SLITRK2Q9H156 845 aa13.97□□□□□ -0.17
LMCD1-204ENST00000426878 RCC2Q9P258 522 aaKnown RBP13.97□□□□□ -0.17
LMCD1-204ENST00000426878 MEIKINA0A087WXM9 373 aa13.96□□□□□ -0.18
LMCD1-204ENST00000426878 A0A087X0M5 115 aa13.96□□□□□ -0.18
LMCD1-204ENST00000426878 A0A1B0GX30 115 aa13.96□□□□□ -0.18
LMCD1-204ENST00000426878 POM121CA8CG34 1229 aa13.96□□□□□ -0.18
LMCD1-204ENST00000426878 ARL6IP5O75915 188 aa13.96□□□□□ -0.18
LMCD1-204ENST00000426878 MGMTP16455 207 aa13.96□□□□□ -0.18
LMCD1-204ENST00000426878 RELBQ01201 579 aa13.96□□□□□ -0.18
LMCD1-204ENST00000426878 EMX1Q04741 257 aaPredicted RBP13.96□□□□□ -0.18
LMCD1-204ENST00000426878 LDLRAD2Q5SZI1 272 aa13.96□□□□□ -0.18
LMCD1-204ENST00000426878 PRAMEF5Q5TYX0 476 aa13.96□□□□□ -0.18
LMCD1-204ENST00000426878 TMEM104Q8NE00 496 aa13.96□□□□□ -0.18
LMCD1-204ENST00000426878 OR4F5Q8NH21 305 aa13.96□□□□□ -0.18
LMCD1-204ENST00000426878 ZNF747Q9BV97 191 aa13.96□□□□□ -0.18
LMCD1-204ENST00000426878 ING3Q9NXR8 418 aa13.96□□□□□ -0.18
LMCD1-204ENST00000426878 H3BUI4 141 aa13.95□□□□□ -0.18
LMCD1-204ENST00000426878 GLAP06280 429 aa13.95□□□□□ -0.18
LMCD1-204ENST00000426878 RAG2P55895 527 aa13.95□□□□□ -0.18
LMCD1-204ENST00000426878 DYNC1I2Q13409 638 aaKnown RBP13.95□□□□□ -0.18
LMCD1-204ENST00000426878 ABHD12Q8N2K0 398 aa13.95□□□□□ -0.18
LMCD1-204ENST00000426878 SVOPQ8N4V2 548 aa13.95□□□□□ -0.18
LMCD1-204ENST00000426878 OR13A1Q8NGR1 328 aa13.95□□□□□ -0.18
LMCD1-204ENST00000426878 Q96M66 194 aa13.95□□□□□ -0.18
LMCD1-204ENST00000426878 CST11Q9H112 138 aa13.95□□□□□ -0.18
LMCD1-204ENST00000426878 LRRC42Q9Y546 428 aa13.95□□□□□ -0.18
LMCD1-204ENST00000426878 TMEM30CPA0ZSE6 113 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 NPIPB11E5RHQ5 1161 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 H3BUX3 64 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 SLC22A1O15245 554 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 CRTAPO75718 401 aaPredicted RBP13.94□□□□□ -0.18
LMCD1-204ENST00000426878 IGLV1-47P01700 117 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 OMGP23515 440 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 GDNFP39905 211 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 FABP5Q01469 135 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 RBM39Q14498 530 aaKnown RBP13.94□□□□□ -0.18
LMCD1-204ENST00000426878 SSX1Q16384 188 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 ATAD3CQ5T2N8 411 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 DYNAPQ8N1N2 210 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 OR10A7Q8NGE5 316 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 ZNF596Q8TC21 504 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 PIFOQ8TCI5 191 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 TAF15Q92804 592 aaKnown RBP eCLIP13.94□□□□□ -0.18
LMCD1-204ENST00000426878 KIRREL1Q96J84 757 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 SELENOIQ9C0D9 397 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 BANF2Q9H503 90 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 BEX1Q9HBH7 125 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 CALYQ9NYX4 217 aa13.94□□□□□ -0.18
LMCD1-204ENST00000426878 IL1AP01583 271 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 GZMHP20718 246 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 MDKP21741 143 aaPredicted RBP13.93□□□□□ -0.18
LMCD1-204ENST00000426878 PAX6P26367 422 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 HTR1DP28221 377 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 GLP1RP43220 463 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 DYNLT3P51808 116 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 SSX2Q16385 188 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 UBE2UQ5VVX9 321 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 CD200R1LQ6Q8B3 271 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 BAIAP2L2Q6UXY1 529 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 ZNF497Q6ZNH5 498 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 LIAT1Q6ZQX7 453 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 SPARTQ8N0X7 666 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 GAPTQ8N292 157 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 OR4P4Q8NGL7 312 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 OR6M1Q8NGM8 313 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 NDUFB11Q9NX14 153 aa13.93□□□□□ -0.18
LMCD1-204ENST00000426878 MCRIP1C9JLW8 97 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 CA11O75493 328 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 MT-ND4P03905 459 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 VSIG8P0DPA2 414 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 FUT3P21217 361 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 GALP22466 123 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 HTR2CP28335 458 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 RAB12Q6IQ22 244 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 SLC16A12Q6ZSM3 486 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 KCNG3Q8TAE7 436 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 MRGPRDQ8TDS7 321 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 CREB3L1Q96BA8 519 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 GFI1Q99684 422 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 C16orf95Q9H693 158 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 ZNF286AQ9HBT8 521 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 RAB18Q9NP72 206 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 DPM3Q9P2X0 92 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 FBN3Q75N90 2809 aa13.92□□□□□ -0.18
LMCD1-204ENST00000426878 CLPSL1A2RUU4 121 aa13.91□□□□□ -0.18
LMCD1-204ENST00000426878 HAX1O00165 279 aa13.91□□□□□ -0.18
LMCD1-204ENST00000426878 TSPAN9O75954 239 aa13.91□□□□□ -0.18
LMCD1-204ENST00000426878 BPNT1O95861 308 aa13.91□□□□□ -0.18
LMCD1-204ENST00000426878 CALRP27797 417 aaKnown RBP13.91□□□□□ -0.18
LMCD1-204ENST00000426878 QRFPP83859 136 aa13.91□□□□□ -0.18
LMCD1-204ENST00000426878 SIGIRRQ6IA17 410 aa13.91□□□□□ -0.18
LMCD1-204ENST00000426878 DHRS7BQ6IAN0 325 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms