RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 HSPE1-MOB4S4R3N1 261 aa7.95□□□□□ -1.14
GACAT3-201ENST00000426539 KIAA2026Q5HYC2 2103 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 MEIKINA0A087WXM9 373 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 PSMB11A5LHX3 300 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 TMEM212A6NML5 194 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 M0QZK8 103 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 FAM106CPP0CH98 169 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 SSTR5P35346 364 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 ALDH3A2P51648 485 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 GTF2A1P52655 376 aaPredicted RBP7.94□□□□□ -1.14
GACAT3-201ENST00000426539 RPL23AP62750 156 aaKnown RBP7.94□□□□□ -1.14
GACAT3-201ENST00000426539 PAX5Q02548 391 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 LTC4SQ16873 150 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 PAN3Q58A45 887 aaKnown RBP7.94□□□□□ -1.14
GACAT3-201ENST00000426539 XAF1Q6GPH4 301 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 FAM53AQ6NSI3 398 aaPredicted RBP7.94□□□□□ -1.14
GACAT3-201ENST00000426539 ASCL4Q6XD76 172 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 CBR4Q8N4T8 237 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 OR5D14Q8NGL3 314 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 OR5AK2Q8NH90 309 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 RFESDQ8TAC1 157 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 MRGPRDQ8TDS7 321 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 TAS2R4Q9NYW5 299 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 DHDHQ9UQ10 334 aa7.94□□□□□ -1.14
GACAT3-201ENST00000426539 A0A1W2PPE3 182 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 LINC01548A6NM66 108 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 CIB2O75838 187 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 DUS4LO95620 317 aaKnown RBP7.93□□□□□ -1.14
GACAT3-201ENST00000426539 SOX2P48431 317 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 THBS3P49746 956 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 GNG10P50151 68 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 HNF4GQ14541 408 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 IL13RA2Q14627 380 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 VAX1Q5SQQ9 334 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 OR2W3Q7Z3T1 314 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 ZNF565Q8N9K5 539 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 OR52I1Q8NGK6 324 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 RHOXF1Q8NHV9 184 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 TNFAIP8L1Q8WVP5 186 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 TSEN15Q8WW01 171 aaKnown RBP7.93□□□□□ -1.14
GACAT3-201ENST00000426539 APH1BQ8WW43 257 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 SLC29A1Q99808 456 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 JAM3Q9BX67 310 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 PCDHB16Q9NRJ7 776 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 MRPS18AQ9NVS2 196 aaKnown RBP7.93□□□□□ -1.14
GACAT3-201ENST00000426539 LINC00527Q9UJ94 153 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 AMMECR1Q9Y4X0 333 aaPredicted RBP7.93□□□□□ -1.14
GACAT3-201ENST00000426539 ORC6Q9Y5N6 252 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 GMPPBQ9Y5P6 360 aa7.93□□□□□ -1.14
GACAT3-201ENST00000426539 SNTNA6NMZ2 147 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 C15orf65H3BRN8 121 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 FGF16O43320 207 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 CDRT1O95170 752 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 FADS2O95864 444 aaKnown RBP7.92□□□□□ -1.14
GACAT3-201ENST00000426539 IGKV1D-33P01593 117 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 IGKV1-33P01594 117 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 CCDC159P0C7I6 412 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 LIMS3P0CW19 117 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 LIMS4P0CW20 117 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 TMEM11P17152 192 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 RAB3AP20336 220 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 C21orf33P30042 268 aaPredicted RBP7.92□□□□□ -1.14
GACAT3-201ENST00000426539 RAB7AP51149 207 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 MADCAM1Q13477 382 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 EBI3Q14213 229 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 HES1Q14469 280 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 DEFB121Q5J5C9 76 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 C8orf86Q6ZUL3 223 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 SATL1Q86VE3 508 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 OR8H3Q8N146 312 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 SUMF2Q8NBJ7 301 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 OR10A7Q8NGE5 316 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 RBMXL1Q96E39 390 aaKnown RBP7.92□□□□□ -1.14
GACAT3-201ENST00000426539 MRPL48Q96GC5 212 aaKnown RBP7.92□□□□□ -1.14
GACAT3-201ENST00000426539 P2RX4Q99571 388 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 DPCDQ9BVM2 203 aaPredicted RBP7.92□□□□□ -1.14
GACAT3-201ENST00000426539 BARHL1Q9BZE3 327 aa7.92□□□□□ -1.14
GACAT3-201ENST00000426539 SIRT4Q9Y6E7 314 aaPredicted RBP7.92□□□□□ -1.14
GACAT3-201ENST00000426539 KMT2CQ8NEZ4 4911 aaKnown RBP7.92□□□□□ -1.14
GACAT3-201ENST00000426539 IGHV3-72A0A0B4J1Y9 119 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 IGHV1-3A0A0C4DH29 117 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 SERPINE3A8MV23 424 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 HSD17B6O14756 317 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 HTR3BO95264 441 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 CLIC3O95833 236 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 IGHG2P01859 326 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 MYCNOSP40205 109 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 REG1BP48304 166 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 KCNJ3P48549 501 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 GBX2P52951 348 aaPredicted RBP7.91□□□□□ -1.14
GACAT3-201ENST00000426539 ZNF816Q0VGE8 651 aaPredicted RBP7.91□□□□□ -1.14
GACAT3-201ENST00000426539 RAB40BQ12829 278 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 MRPL28Q13084 256 aaKnown RBP7.91□□□□□ -1.14
GACAT3-201ENST00000426539 RSU1Q15404 277 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 NHLRC3Q5JS37 347 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 SLC16A12Q6ZSM3 486 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 STPG2Q8N412 459 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 SVOPQ8N4V2 548 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 Q8N6K4 173 aa7.91□□□□□ -1.14
GACAT3-201ENST00000426539 UBALD1Q8TB05 177 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms