RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 CRIM1Q9NZV1 1036 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 KIAA1456Q9P272 454 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 FREM2Q5SZK8 3169 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 EXPH5Q8NEV8 1989 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 DOCK7Q96N67 2140 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 LOC102723996A0A087X1L8 192 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 ZFP92A6NM28 416 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF716A6NP11 495 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 LMO1P25800 156 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 RAB11AP62491 216 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 TMEM267Q0VDI3 215 aaPredicted RBP6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 ICAM4Q14773 271 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 C4orf17Q53FE4 359 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 LYSMD4Q5XG99 296 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 FAM185AQ8N0U4 392 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 C17orf78Q8N4C9 275 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 AGBL5Q8NDL9 886 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 IFI44Q8TCB0 444 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 RDH5Q92781 318 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 MALSU1Q96EH3 234 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 GNPNAT1Q96EK6 184 aaPredicted RBP6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 TVP23CQ96ET8 276 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF488Q96MN9 340 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 TMEM56Q96MV1 263 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 OR51B6Q9H340 312 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 Q9N2K0 584 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 TMEM56-RWDD3S4R434 201 aa6.46□□□□□ -1.37
SMARCC1-202ENST00000425518 TRAV39A0A0B4J263 110 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 C5orf49A4QMS7 147 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 ZNF732B4DXR9 585 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 HOXA5P20719 270 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 VDAC1P21796 283 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 MLF1P58340 268 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 ERVFRD-1P60508 538 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 PRDX4Q13162 271 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 OR8B8Q15620 311 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 MPV17LQ2QL34 196 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 PRR18Q8N4B5 295 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 OR2V1Q8NHB1 315 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 UBALD1Q8TB05 177 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 SAP25Q8TEE9 199 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 PFDN5Q99471 154 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 PLSCR2Q9NRY7 297 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 PPIHO43447 177 aaKnown RBP6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 IFNA5P01569 189 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 TRGC2P03986 189 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 SERPINE2P07093 398 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 ZNF16P17020 682 aaPredicted RBP6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 GDF1P27539 372 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 CLDN15P56746 228 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 B3GALT5-AS1P59052 145 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 STARD6P59095 220 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 TLE4Q04727 773 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 HERPUD1Q15011 391 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 DAZAP2Q15038 168 aaPredicted RBP6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 ELOBQ15370 118 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 ZNF610Q8N9Z0 462 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 OR10D4PQ8NGN7 298 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 C11orf1Q9H5F2 150 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 WDR54Q9H977 334 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 IL36GQ9NZH8 169 aa6.46□□□□□ -1.38
SMARCC1-202ENST00000425518 TRAPPC2LH3BP13 241 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 MRPL33O75394 65 aaKnown RBP6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 LY86O95711 162 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 IAPPP10997 89 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 SRD5A2P31213 254 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 FGF8P55075 233 aaPredicted RBP6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 ARF1P84077 181 aaKnown RBP6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 ID3Q02535 119 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 TLE1Q04724 770 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 PYY3Q5JQD4 70 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 GFI1BQ5VTD9 330 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 CDPF1Q6NVV7 123 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 SPNS3Q6ZMD2 512 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 MRPL21Q7Z2W9 205 aaKnown RBP6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 GGNQ86UU5 652 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 STX12Q86Y82 276 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 ODF3L1Q8IXM7 274 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 MKXQ8IYA7 352 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 M1APQ8TC57 530 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 SIGLEC12Q96PQ1 595 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 HIST1H2AAQ96QV6 131 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 RSG1Q9BU20 258 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 SMDT1Q9H4I9 107 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 GAR1Q9NY12 217 aaKnown RBP6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 RBM7Q9Y580 266 aaKnown RBP6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 KNTC1P50748 2209 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 A0A0G2JRQ6 117 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 A0A1B0GW64 132 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 BTBD17A6NE02 478 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 PGLYRP1O75594 196 aaPredicted RBP6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 SLC34A2O95436 690 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 IGHV2-70P01814 119 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 FGF5P12034 268 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 MDKP21741 143 aaPredicted RBP6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 FOLR3P41439 243 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 CDX1P47902 265 aaPredicted RBP6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 IGFBP7Q16270 282 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 OR2B11Q5JQS5 317 aa6.45□□□□□ -1.38
SMARCC1-202ENST00000425518 UBE2ZQ9H832 354 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms