RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 NPFFR1Q9GZQ6 430 aa8.19□□□□□ -1.1
NCKIPSD-202ENST00000413374 BANF2Q9H503 90 aa8.19□□□□□ -1.1
NCKIPSD-202ENST00000413374 ZNF702PQ9H963 129 aa8.19□□□□□ -1.1
NCKIPSD-202ENST00000413374 FKBP14Q9NWM8 211 aa8.19□□□□□ -1.1
NCKIPSD-202ENST00000413374 PAK1IP1Q9NWT1 392 aaPredicted RBP8.19□□□□□ -1.1
NCKIPSD-202ENST00000413374 SCN3BQ9NY72 215 aa8.19□□□□□ -1.1
NCKIPSD-202ENST00000413374 CALYQ9NYX4 217 aa8.19□□□□□ -1.1
NCKIPSD-202ENST00000413374 IDI2-AS1Q9NZ38 188 aa8.19□□□□□ -1.1
NCKIPSD-202ENST00000413374 MRPS28Q9Y2Q9 187 aaKnown RBP8.19□□□□□ -1.1
NCKIPSD-202ENST00000413374 SH2D7A6NKC9 451 aaPredicted RBP8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 LEUTXA8MZ59 168 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 BUB1B-PAK6H3BSN5 160 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 GPX5O75715 221 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 TSPAN15O95858 294 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 GTF2F2P13984 249 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 SSTR5P35346 364 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 GNG10P50151 68 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 EFNB2P52799 333 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 PRRX1P54821 245 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 RBM11P57052 281 aaKnown RBP8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 BDH1Q02338 343 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 MED22Q15528 200 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 FBLN7Q53RD9 439 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 TPTE2P1Q5T6R2 138 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 FAM27D1Q5T7N8 215 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 AWAT2Q6E213 333 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 FAM53AQ6NSI3 398 aaPredicted RBP8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 Q6ZTK2 550 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 MYDGFQ969H8 173 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 KIRREL1Q96J84 757 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 CCDC90BQ9GZT6 254 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 IL36GQ9NZH8 169 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 PITPNC1Q9UKF7 332 aa8.18□□□□□ -1.1
NCKIPSD-202ENST00000413374 ZNF780AO75290 641 aaPredicted RBP8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 CRTAPO75718 401 aaPredicted RBP8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 IGLV1-47P01700 117 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 HSMCR30P0CW71 290 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 FSTP19883 344 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 DIAPH2-AS1Q14236 149 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 HERPUD1Q15011 391 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 SPHARQ15513 63 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 HLA-DRB5Q30154 266 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 TMEM95Q3KNT9 176 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 LIAT1Q6ZQX7 453 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 CEACAM19Q7Z692 300 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 OR9G1Q8NH87 305 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 CAPSLQ8WWF8 208 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 ARL11Q969Q4 196 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 TMEM203Q969S6 136 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 FAM46BQ96A09 425 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 MND1Q9BWT6 205 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 SELENOIQ9C0D9 397 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 PRSS22Q9GZN4 317 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 PCDHB16Q9NRJ7 776 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 PSG11Q9UQ72 335 aa8.17□□□□□ -1.1
NCKIPSD-202ENST00000413374 IGHV3-43A0A0B4J1X8 118 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 TMEM30CPA0ZSE6 113 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 UBE2QL1A1L167 161 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 MCRIP1C9JLW8 97 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 H0YHG0 523 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 LY6LH3BQJ8 138 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 H3BUI4 141 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 J3QR06 171 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 KCNAB3O43448 404 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 PEX14O75381 377 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 IL1AP01583 271 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 MT-ND4P03905 459 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 CD1AP06126 327 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 IGHV3-43DP0DP04 118 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 CD28P10747 220 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 MYF6P23409 242 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 CD34P28906 385 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 BRS3P32247 399 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 MAP2K4P45985 399 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 DYNLT3P51808 116 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 GP2P55259 537 aaKnown RBP8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 DEFA6Q01524 100 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 GPR176Q14439 515 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 MPV17LQ2QL34 196 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 LIPKQ5VXJ0 399 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 OR10K2Q6IF99 312 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 UNQ9370/PRO34162Q6UXP9 181 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 C5orf24Q7Z6I8 188 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 PRR18Q8N4B5 295 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 TMEM104Q8NE00 496 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 OR4K15Q8NH41 348 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 CNBD2Q96M20 576 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 MMP28Q9H239 520 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 RANBP3Q9H6Z4 567 aaPredicted RBP8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 SERTAD4Q9NUC0 356 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 ETAA1Q9NY74 926 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 TRAPPC2LQ9UL33 140 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 LSM2Q9Y333 95 aaKnown RBP8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 TPRKBQ9Y3C4 175 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 PEX16Q9Y5Y5 336 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 NBEAL1Q6ZS30 2694 aa8.16□□□□□ -1.1
NCKIPSD-202ENST00000413374 A0A087X0M5 115 aa8.15□□□□□ -1.1
NCKIPSD-202ENST00000413374 A0A1B0GX30 115 aa8.15□□□□□ -1.1
NCKIPSD-202ENST00000413374 FAM90A22PA8MWA6 464 aa8.15□□□□□ -1.1
NCKIPSD-202ENST00000413374 NPIPB11E5RHQ5 1161 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms