RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 RAB12Q6IQ22 244 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 HCP5Q6MZN7 132 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 HEPN1Q6WQI6 88 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 OR2W3Q7Z3T1 314 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 RTN4RL2Q86UN3 420 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 PNKDQ8N490 385 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 TMEM104Q8NE00 496 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 TSPAN14Q8NG11 270 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 NEDD4LQ96PU5 975 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 URM1Q9BTM9 101 aaKnown RBP8.9□□□□□ -0.98
CHMP3-205ENST00000409810 TMEM133Q9H2Q1 129 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 ZNF696Q9H7X3 374 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 RAB9BQ9NP90 201 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 KIF25Q9UIL4 384 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 TBL2Q9Y4P3 447 aaKnown RBP8.9□□□□□ -0.98
CHMP3-205ENST00000409810 SOX21Q9Y651 276 aaPredicted RBP8.9□□□□□ -0.98
CHMP3-205ENST00000409810 KBTBD11-OT1A0A1B0GTJ5 212 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 AIPO00170 330 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 HOXA3O43365 443 aaPredicted RBP8.89□□□□□ -0.99
CHMP3-205ENST00000409810 PDCD6O75340 191 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 CA11O75493 328 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 RNASE1P07998 156 aaKnown RBP8.89□□□□□ -0.99
CHMP3-205ENST00000409810 VSIG8P0DPA2 414 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 RAB3BP20337 219 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 FUT3P21217 361 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 CDK2P24941 298 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 FGF9P31371 208 aaPredicted RBP8.89□□□□□ -0.99
CHMP3-205ENST00000409810 RPS27AP62979 156 aaKnown RBP8.89□□□□□ -0.99
CHMP3-205ENST00000409810 DYNC1I2Q13409 638 aaKnown RBP8.89□□□□□ -0.99
CHMP3-205ENST00000409810 FAM189A2Q15884 450 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 TIMM50Q3ZCQ8 353 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 PRAMEF5Q5TYX0 476 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 ZNF626Q68DY1 528 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 OR11H6Q8NGC7 330 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 PLPPR1Q8TBJ4 325 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 ZNF596Q8TC21 504 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 MRGPRDQ8TDS7 321 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 DUX5Q96PT3 197 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 MDFIQ99750 246 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 TM2D1Q9BX74 207 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 CLEC7AQ9BXN2 247 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 TXNL4BQ9NX01 149 aaKnown RBP8.89□□□□□ -0.99
CHMP3-205ENST00000409810 ETAA1Q9NY74 926 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 ZNRD1Q9P1U0 126 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 STEAP1Q9UHE8 339 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 PEX16Q9Y5Y5 336 aa8.89□□□□□ -0.99
CHMP3-205ENST00000409810 FBN1P35555 2871 aaKnown RBP8.89□□□□□ -0.99
CHMP3-205ENST00000409810 IGHV2-26A0A0B4J1V2 119 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 TMEM14DPA8MWL7 114 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 ODF3BA8MYP8 253 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 IL1AP01583 271 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 CRYBA1P05813 215 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 CD36P16671 472 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 GZMHP20718 246 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 CFPP27918 469 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 P2RY14Q15391 338 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 NKAPLQ5M9Q1 402 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 C6orf183Q5T699 404 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 MINOS1Q5TGZ0 78 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 OR10K2Q6IF99 312 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 C16orf87Q6PH81 154 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 TRAT1Q6PIZ9 186 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 ZNF497Q6ZNH5 498 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 TPRA1Q86W33 373 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.88□□□□□ -0.99
CHMP3-205ENST00000409810 BEND2Q8NDZ0 799 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 OR10A7Q8NGE5 316 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 OR13A1Q8NGR1 328 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 OR5R1Q8NH85 324 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 SPATA3Q8NHX4 192 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 CREB3L1Q96BA8 519 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 FAM3DQ96BQ1 224 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 KCTD7Q96MP8 289 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 GFI1Q99684 422 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 CALYQ9NYX4 217 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 ZNF581Q9P0T4 197 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 MINOS1-NBL1R4GNA1 71 aa8.88□□□□□ -0.99
CHMP3-205ENST00000409810 A0A087X0M5 115 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 A0A1B0GX30 115 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 IFITM5A6NNB3 132 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 TOR1AO14656 332 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 CD34P28906 385 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 IER3P46695 156 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 ARHGDIBP52566 201 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 OR10A3P58181 314 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 RPL15P61313 204 aaKnown RBP8.87□□□□□ -0.99
CHMP3-205ENST00000409810 QRFPP83859 136 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 UNC119Q13432 240 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 AANATQ16613 207 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 C17orf58Q2M2W7 97 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 LRRC75BQ2VPJ9 315 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 HES5Q5TA89 166 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 ABHD12Q8N2K0 398 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 OR51D1Q8NGF3 324 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 NDNFQ8TB73 568 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 GCDHQ92947 438 aaPredicted RBP8.87□□□□□ -0.99
CHMP3-205ENST00000409810 MALSU1Q96EH3 234 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 CHCHD6Q9BRQ6 235 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 MEGF9Q9H1U4 602 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 LINC00574Q9H8X3 128 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms