RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 SPSB3Q6PJ21 355 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 LCN15Q6UWW0 184 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 SELENOHQ8IZQ5 122 aaKnown RBP10.28□□□□□ -0.76
RBM39-206ENST00000403542 EDARADDQ8WWZ3 215 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 RSG1Q9BU20 258 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 GPR35Q9HC97 309 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 ZNF503-AS2A6NEH8 195 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 SLC22A20A6NK97 555 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 AP4M1O00189 453 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 LY86O95711 162 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 CST2P09228 141 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 SMIM6P0DI80 62 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 B3GALT5-AS1P59052 145 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 ERVFRD-1P60508 538 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 RPS16P62249 146 aaKnown RBP10.28□□□□□ -0.76
RBM39-206ENST00000403542 FOXL2NBQ6ZUU3 175 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 ZNF429Q86V71 674 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 AGBL5Q8NDL9 886 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 OR1K1Q8NGR3 316 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 Q8WTZ3 238 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 DUSP23Q9BVJ7 150 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 HES7Q9BYE0 225 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 PRRG4Q9BZD6 226 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 FAM86C1Q9NVL1 165 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 IGKV1-6A0A0C4DH72 117 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 ZNF732B4DXR9 585 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 CNOT4O95628 575 aaKnown RBP10.28□□□□□ -0.76
RBM39-206ENST00000403542 RPL23AP62750 156 aaKnown RBP10.28□□□□□ -0.76
RBM39-206ENST00000403542 HOXA4Q00056 320 aaPredicted RBP10.28□□□□□ -0.76
RBM39-206ENST00000403542 PRDX4Q13162 271 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 CLEC12BQ2HXU8 276 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 ODF3L1Q8IXM7 274 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 ZNF100Q8IYN0 542 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 CMTM1Q8IZ96 169 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 MAFAQ8NHW3 353 aaPredicted RBP10.28□□□□□ -0.76
RBM39-206ENST00000403542 ZNF552Q9H707 407 aaPredicted RBP10.28□□□□□ -0.76
RBM39-206ENST00000403542 VSIRQ9H7M9 311 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 MTCH1Q9NZJ7 389 aa10.28□□□□□ -0.76
RBM39-206ENST00000403542 STRAPQ9Y3F4 350 aaKnown RBP10.28□□□□□ -0.76
RBM39-206ENST00000403542 CYB5BO43169 146 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 IGHV2-5P01817 119 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 S100A8P05109 93 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 EIF2S3P41091 472 aaKnown RBP10.27□□□□□ -0.77
RBM39-206ENST00000403542 RAB11AP62491 216 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 ARF1P84077 181 aaKnown RBP10.27□□□□□ -0.77
RBM39-206ENST00000403542 Q0VFX4 171 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 ZNF266Q14584 549 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 RNF212Q495C1 297 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 AKR1C8PQ5T2L2 129 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 SPNS3Q6ZMD2 512 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 IL22RA1Q8N6P7 574 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 TCTEX1D2Q8WW35 142 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 C10orf35Q96D05 121 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 PLEKHF2Q9H8W4 249 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 WSB1Q9Y6I7 421 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 USF3Q68DE3 2245 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 FKBP2P26885 142 aaKnown RBP10.27□□□□□ -0.77
RBM39-206ENST00000403542 MLF1P58340 268 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 RHEBQ15382 184 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 TDHQ8IZJ6 230 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 LRTM2Q8N967 370 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 PCED1AQ9H1Q7 454 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 METTL1Q9UBP6 276 aaKnown RBP10.27□□□□□ -0.77
RBM39-206ENST00000403542 RBM7Q9Y580 266 aaKnown RBP10.27□□□□□ -0.77
RBM39-206ENST00000403542 CEP250Q9BV73 2442 aa10.27□□□□□ -0.77
RBM39-206ENST00000403542 FAM166BA8MTA8 275 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 MRPL33O75394 65 aaKnown RBP10.26□□□□□ -0.77
RBM39-206ENST00000403542 IFNA17P01571 189 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 PSG2P11465 335 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 FOLR3P41439 243 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 EXT1Q16394 746 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 TMEM42Q69YG0 159 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 CPT1CQ8TCG5 803 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 SGCZQ96LD1 299 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 TAAR9Q96RI9 348 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 LYRM2Q9NU23 88 aaPredicted RBP10.26□□□□□ -0.77
RBM39-206ENST00000403542 ERRFI1Q9UJM3 462 aaPredicted RBP10.26□□□□□ -0.77
RBM39-206ENST00000403542 PPP1R3CQ9UQK1 317 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 NOSIPQ9Y314 301 aaKnown RBP10.26□□□□□ -0.77
RBM39-206ENST00000403542 CHD3Q12873 2000 aaKnown RBP10.26□□□□□ -0.77
RBM39-206ENST00000403542 ICE1Q9Y2F5 2266 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 HSPA12AO43301 675 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 TRGC2P03986 189 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 METTL15P1P0C7V9 234 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 SELEP16581 610 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 HEPN1Q6WQI6 88 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 MRPL21Q7Z2W9 205 aaKnown RBP10.26□□□□□ -0.77
RBM39-206ENST00000403542 MED12LQ86YW9 2145 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 OR2Y1Q8NGV0 311 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 OR2V1Q8NHB1 315 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 GGACTQ9BVM4 153 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 DOK5Q9P104 306 aa10.26□□□□□ -0.77
RBM39-206ENST00000403542 IFITM10A6NMD0 228 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 RPL36A-HNRNPH2H7BZ11 118 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 NDUFS6O75380 124 aaKnown RBP10.25□□□□□ -0.77
RBM39-206ENST00000403542 RAB5CP51148 216 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 ELLP55199 621 aaPredicted RBP10.25□□□□□ -0.77
RBM39-206ENST00000403542 ICAM4Q14773 271 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 OR2B11Q5JQS5 317 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 TMEM211Q6ICI0 200 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms