RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 FAM106AQ4KMX7 169 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 SOWAHCQ53LP3 525 aaPredicted RBP9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 OR10A7Q8NGE5 316 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 GMPPAQ96IJ6 420 aaPredicted RBP9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 C12orf57Q99622 126 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 LINC00862A6NCI5 91 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 LRP3O75074 770 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 ACSM4P0C7M7 580 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 CTSSP25774 331 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 LPAR6P43657 344 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 ATP1A1-AS1Q5TC04 95 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 MYOZ3Q8TDC0 251 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 MARC2Q969Z3 335 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 TINAGQ9UJW2 476 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 ZAR1LA6NP61 321 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 RFX2P48378 723 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 WNT3P56703 355 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 PIGPP57054 158 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 TWIST1Q15672 202 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 OR52I1Q8NGK6 324 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 PTP4A1Q93096 173 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 ABCA3Q99758 1704 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 GSTZ1O43708 216 aaPredicted RBP9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 B4GALT3O60512 393 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 MDH2P40926 338 aaKnown RBP9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 CD81P60033 236 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 PRSS42Q7Z5A4 293 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 OR10J6PQ8NGY7 276 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 MCHR2Q969V1 340 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 ST6GAL2Q96JF0 529 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 IGKV3-20P01619 116 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 SIAH3Q8IW03 269 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 MRAPQ8TCY5 172 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 ITLN2Q8WWU7 325 aaPredicted RBP9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 PHYHIPLQ96FC7 376 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 DERL3Q96Q80 235 aa9.68□□□□□ -0.86
CACNA1C-216ENST00000399638 WNT9BO14905 357 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 NTN1O95631 604 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 OR10D4PQ8NGN7 298 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 LHX4Q969G2 390 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 AHDC1Q5TGY3 1603 aaPredicted RBP9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 GPX5O75715 221 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 MGMTP16455 207 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 BCL3P20749 454 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 ENDOGQ14249 297 aaKnown RBP9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 UNQ5815/PRO19632Q6UWF5 114 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 SYT8Q8NBV8 401 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 SLC25A21Q9BQT8 299 aaPredicted RBP9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 LOC105371242A0A075B767 164 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 AP4M1O00189 453 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 FGF9P31371 208 aaPredicted RBP9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 LTBRP36941 435 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 TIAL1Q01085 375 aaKnown RBP eCLIP9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 VGLL1Q99990 258 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 IFT22Q9H7X7 185 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 CLPSL1A2RUU4 121 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 S100A11P31949 105 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 WDR73Q6P4I2 378 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 C11orf44Q8N8P7 122 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 HMGCLL1Q8TB92 370 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 LPAR3Q9UBY5 353 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 ARID1AO14497 2285 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 A0A1W2PS18 150 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 NAT2P11245 290 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 HOXB3P14651 431 aaPredicted RBP9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 KCNJ3P48549 501 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 VSTM2AQ8TAG5 236 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 FBLIM1Q8WUP2 373 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 TEX37Q96LM6 180 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 TMPRSS13Q9BYE2 586 aa9.67□□□□□ -0.86
CACNA1C-216ENST00000399638 PRR33A8MZF0 331 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 FCN1O00602 326 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 FOXH1O75593 365 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 EGR3Q06889 387 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 FUT7Q11130 342 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 LHFPL5Q8TAF8 219 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 MAP6Q96JE9 813 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 OR10C1Q96KK4 312 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 MYO18AQ92614 2054 aaKnown RBP9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 HMGN4O00479 90 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 HAND1O96004 215 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 OTX1P32242 354 aaPredicted RBP9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 ZNF117Q03924 483 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 FAM210BQ96KR6 192 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 TEAD3Q99594 435 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 GABRB1P18505 474 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 EVX1P49640 407 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 MGAT2Q10469 447 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 MAP1LC3CQ9BXW4 147 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 CHRNA10Q9GZZ6 450 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 CLEC2DQ9UHP7 191 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 PRSS50Q9UI38 385 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 ITGB4P16144 1822 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 LCN2P80188 198 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 PRB3Q04118 309 aaPredicted RBP9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 GAB4Q2WGN9 574 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 Q6ZNB5 142 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 ZBTB44Q8NCP5 570 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 OR4P4Q8NGL7 312 aa9.66□□□□□ -0.86
CACNA1C-216ENST00000399638 KLK15Q9H2R5 256 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms