RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 PRSS50Q9UI38 385 aa19.72■□□□□ 0.75
RABGGTA-202ENST00000399409 LHX6Q9UPM6 363 aa19.72■□□□□ 0.75
RABGGTA-202ENST00000399409 IGKV1-6A0A0C4DH72 117 aa19.72■□□□□ 0.75
RABGGTA-202ENST00000399409 H0Y980 276 aa19.72■□□□□ 0.75
RABGGTA-202ENST00000399409 PRH1P02810 166 aa19.72■□□□□ 0.75
RABGGTA-202ENST00000399409 VAMP2P63027 116 aa19.72■□□□□ 0.75
RABGGTA-202ENST00000399409 C3AR1Q16581 482 aa19.72■□□□□ 0.75
RABGGTA-202ENST00000399409 GUK1Q16774 197 aa19.72■□□□□ 0.75
RABGGTA-202ENST00000399409 ZNF880Q6PDB4 577 aa19.72■□□□□ 0.75
RABGGTA-202ENST00000399409 OR10Z1Q8NGY1 313 aa19.72■□□□□ 0.75
RABGGTA-202ENST00000399409 PARP12Q9H0J9 701 aaKnown RBP19.72■□□□□ 0.75
RABGGTA-202ENST00000399409 CCL28Q9NRJ3 127 aa19.72■□□□□ 0.75
RABGGTA-202ENST00000399409 FREM1Q5H8C1 2179 aa19.71■□□□□ 0.75
RABGGTA-202ENST00000399409 HSPB6O14558 160 aa19.71■□□□□ 0.75
RABGGTA-202ENST00000399409 ADAM20O43506 726 aa19.71■□□□□ 0.75
RABGGTA-202ENST00000399409 NMSQ5H8A3 153 aa19.71■□□□□ 0.75
RABGGTA-202ENST00000399409 FBXW9Q5XUX1 488 aa19.71■□□□□ 0.75
RABGGTA-202ENST00000399409 HSD17B11Q8NBQ5 300 aa19.71■□□□□ 0.75
RABGGTA-202ENST00000399409 LFNGQ8NES3 379 aa19.71■□□□□ 0.75
RABGGTA-202ENST00000399409 LILRB1Q8NHL6 650 aaPredicted RBP19.71■□□□□ 0.75
RABGGTA-202ENST00000399409 AKR1E2Q96JD6 320 aa19.71■□□□□ 0.75
RABGGTA-202ENST00000399409 LYRM2Q9NU23 88 aaPredicted RBP19.71■□□□□ 0.75
RABGGTA-202ENST00000399409 FAM24AA6NFZ4 105 aa19.71■□□□□ 0.75
RABGGTA-202ENST00000399409 J3QW42 95 aa19.71■□□□□ 0.75
RABGGTA-202ENST00000399409 HSD17B6O14756 317 aa19.71■□□□□ 0.75
RABGGTA-202ENST00000399409 SMCO4Q9NRQ5 59 aa19.71■□□□□ 0.75
RABGGTA-202ENST00000399409 IL18BPO95998 194 aa19.7■□□□□ 0.74
RABGGTA-202ENST00000399409 NFYBP25208 207 aa19.7■□□□□ 0.74
RABGGTA-202ENST00000399409 LMO1P25800 156 aa19.7■□□□□ 0.74
RABGGTA-202ENST00000399409 POLR2GP62487 172 aaKnown RBP eCLIP19.7■□□□□ 0.74
RABGGTA-202ENST00000399409 HIKESHIQ53FT3 197 aa19.7■□□□□ 0.74
RABGGTA-202ENST00000399409 PCSK4Q6UW60 755 aa19.7■□□□□ 0.74
RABGGTA-202ENST00000399409 C5orf24Q7Z6I8 188 aa19.7■□□□□ 0.74
RABGGTA-202ENST00000399409 PBDC1Q9BVG4 233 aa19.7■□□□□ 0.74
RABGGTA-202ENST00000399409 SCRT1Q9BWW7 348 aa19.7■□□□□ 0.74
RABGGTA-202ENST00000399409 SH3BGRL3Q9H299 93 aa19.7■□□□□ 0.74
RABGGTA-202ENST00000399409 OR51I2Q9H344 312 aa19.7■□□□□ 0.74
RABGGTA-202ENST00000399409 IGSF23A1L1A6 192 aa19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 J3QT63 122 aa19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 HLA-DRB3P79483 266 aa19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 ID3Q02535 119 aa19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 CABLES2Q9BTV7 478 aa19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 ARID1AO14497 2285 aa19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 COL6A3P12111 3177 aa19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 TRAV24A0A0B4J272 114 aa19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 CDX4O14627 284 aaPredicted RBP19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 PGLYRP1O75594 196 aaPredicted RBP19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 TNFSF15O95150 251 aa19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 PAX6P26367 422 aa19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 PPT1P50897 306 aa19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 WDYHV1Q96HA8 205 aa19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 C12orf49Q9H741 205 aa19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 OR2W1Q9Y3N9 320 aa19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 LIPGQ9Y5X9 500 aa19.69■□□□□ 0.74
RABGGTA-202ENST00000399409 CFAP54Q96N23 3096 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 A0A1B0GW64 132 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 M0R296 226 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 SSSCA1O60232 199 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 WNT2P09544 360 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 BAXQ07812 192 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 AVPI1Q5T686 147 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 ZNF324BQ6AW86 544 aaPredicted RBP19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 TMEM252Q8N6L7 170 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 SUMF1Q8NBK3 374 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 OR10J5Q8NHC4 309 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 ZNF488Q96MN9 340 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 DLL3Q9NYJ7 618 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 KLF2Q9Y5W3 355 aaPredicted RBP19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 UMAD1C9J7I0 102 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 K7N7A8 449 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 HS3ST1O14792 307 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 MDH2P40926 338 aaKnown RBP19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 MDP1Q86V88 176 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 H1FOOQ8IZA3 346 aaPredicted RBP19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 ZNF175Q9Y473 711 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 ZDBF2Q9HCK1 2354 aa19.68■□□□□ 0.74
RABGGTA-202ENST00000399409 LRP5LA4QPB2 252 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 DEGS1O15121 323 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 HSPA12AO43301 675 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 LILRA1O75019 489 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 TBC1D28Q2M2D7 210 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 CXorf66Q5JRM2 361 aaPredicted RBP19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 OR2T2Q6IF00 324 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 TMEM182Q6ZP80 229 aaPredicted RBP19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 MOB1BQ7L9L4 216 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 RDH5Q92781 318 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 RTL8AQ9BWD3 113 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 EIF5A2Q9GZV4 153 aaKnown RBP19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 SAV1Q9H4B6 383 aaPredicted RBP19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 TRGV5A0A0B4J1U4 118 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 NPIPB11E5RHQ5 1161 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 CA6P23280 308 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 F2RP25116 425 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 C20orf204Q6ZNR8 217 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 OR8G5Q8NG78 346 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 DEFB127Q9H1M4 99 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 TREM2Q9NZC2 230 aa19.67■□□□□ 0.74
RABGGTA-202ENST00000399409 SLC25A6P12236 298 aa19.66■□□□□ 0.74
RABGGTA-202ENST00000399409 FHITP49789 147 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms