RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 CGB7P0DN87 165 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 PRKACAP17612 351 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 ATF1P18846 271 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 MAP2K4P45985 399 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 RBP2P50120 134 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 ATP1B3P54709 279 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 SNU13P55769 128 aaKnown RBP9.54□□□□□ -0.88
TFF3-202ENST00000398431 AESQ08117 197 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 PDZK1IP1Q13113 114 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 SMN1Q16637 294 aaKnown RBP9.54□□□□□ -0.88
TFF3-202ENST00000398431 C17orf58Q2M2W7 97 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 HLA-DRB5Q30154 266 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 TPTE2P1Q5T6R2 138 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 Q6P435 159 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 C18orf65Q6ZTR6 163 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 TRAPPC6BQ86SZ2 158 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 OSR2Q8N2R0 312 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 ZNF596Q8TC21 504 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 CHPT1Q8WUD6 406 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 C10orf35Q96D05 121 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 LGALS12Q96DT0 336 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 B9D2Q9BPU9 175 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 PLEKHA1Q9HB21 404 aa9.54□□□□□ -0.88
TFF3-202ENST00000398431 CNOT2Q9NZN8 540 aaKnown RBP9.54□□□□□ -0.88
TFF3-202ENST00000398431 TRGV10A0A0A0MS01 117 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 LOC107986453A0A1B0GWG9 222 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 SH2D1BO14796 132 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 AIREO43918 545 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 DBTP11182 482 aaKnown RBP9.53□□□□□ -0.88
TFF3-202ENST00000398431 S100A5P33763 92 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 SOX6P35712 828 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 POU3F4P49335 361 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 THBS3P49746 956 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 MTCP1P56278 107 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 ZNF85Q03923 595 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 SPIN3Q5JUX0 258 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 ZNF367Q7RTV3 350 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 ZNF329Q86UD4 541 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 PP6455Q8WZ26 134 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 RFKQ969G6 155 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 FGGYQ96C11 551 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 COQ2Q96H96 371 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 WWC2-AS2Q96NR7 200 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 COMMD4Q9H0A8 199 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 MRPS18AQ9NVS2 196 aaKnown RBP9.53□□□□□ -0.88
TFF3-202ENST00000398431 RHBDL2Q9NX52 303 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 GSTK1Q9Y2Q3 226 aa9.53□□□□□ -0.88
TFF3-202ENST00000398431 PNMA8CA0A1B0GUJ8 204 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 IRGMA1A4Y4 181 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 ODAMA1E959 279 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 SNTNA6NMZ2 147 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 J3QRE1 110 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 KDM4BO94953 1096 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 CD40LGP29965 261 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 RPL23AP62750 156 aaKnown RBP9.52□□□□□ -0.89
TFF3-202ENST00000398431 CD69Q07108 199 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 C9orf152Q5JTZ5 239 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 UTS2BQ765I0 119 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 THNSL2Q86YJ6 484 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 CENPSQ8N2Z9 138 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 OR6Q1Q8NGQ2 317 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 MCFD2Q8NI22 146 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 DYNC2LI1Q8TCX1 351 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 CAPSLQ8WWF8 208 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 GGHQ92820 318 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 RFT1Q96AA3 541 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 RNFT2Q96EX2 444 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 GAL3ST2Q9H3Q3 398 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 AMBNQ9NP70 447 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 EXOSC4Q9NPD3 245 aaKnown RBP9.52□□□□□ -0.89
TFF3-202ENST00000398431 FKBP14Q9NWM8 211 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 FRRS1LQ9P0K9 344 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 GLS2Q9UI32 602 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 DAPK2Q9UIK4 370 aa9.52□□□□□ -0.89
TFF3-202ENST00000398431 PSMB11A5LHX3 300 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 OOSP1A8MZH6 123 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 M0QZK8 103 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 TOR1AO14656 332 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 PRKACBP22694 351 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 OR3A4PP47883 348 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 PRRX1P54821 245 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 NANOS3P60323 173 aaKnown RBP9.51□□□□□ -0.89
TFF3-202ENST00000398431 VBP1P61758 197 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 DIAPH2-AS1Q14236 149 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 CDK5R1Q15078 307 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 TP53I3Q53FA7 332 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 KHDC1LQ5JSQ8 128 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 OR10H4Q8NGA5 316 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 OR2G2Q8NGZ5 317 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 CREB3L1Q96BA8 519 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 NOL4LQ96MY1 436 aaPredicted RBP9.51□□□□□ -0.89
TFF3-202ENST00000398431 SPACA5Q96QH8 159 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 P2RX4Q99571 388 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 DCSTAMPQ9H295 470 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 AKIP1Q9NQ31 210 aa9.51□□□□□ -0.89
TFF3-202ENST00000398431 EXOGQ9Y2C4 368 aaKnown RBP9.51□□□□□ -0.89
TFF3-202ENST00000398431 RPL36Q9Y3U8 105 aaKnown RBP9.51□□□□□ -0.89
TFF3-202ENST00000398431 FUOMA2VDF0 154 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 LINC01548A6NM66 108 aa9.5□□□□□ -0.89
TFF3-202ENST00000398431 ZNF729A6NN14 1252 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms