RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 ARG1P05089 322 aa20.69■□□□□ 0.9
TSPAN4-207ENST00000397411 CDK2P24941 298 aa20.69■□□□□ 0.9
TSPAN4-207ENST00000397411 HES5Q5TA89 166 aa20.69■□□□□ 0.9
TSPAN4-207ENST00000397411 PRAMEF5Q5TYX0 476 aa20.69■□□□□ 0.9
TSPAN4-207ENST00000397411 RSBN1Q5VWQ0 802 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-207ENST00000397411 SLC35E4Q6ICL7 350 aa20.69■□□□□ 0.9
TSPAN4-207ENST00000397411 NEDD4LQ96PU5 975 aa20.69■□□□□ 0.9
TSPAN4-207ENST00000397411 PRDM13Q9H4Q3 707 aa20.69■□□□□ 0.9
TSPAN4-207ENST00000397411 TXNL4BQ9NX01 149 aaKnown RBP20.69■□□□□ 0.9
TSPAN4-207ENST00000397411 MELTFP08582 738 aa20.68■□□□□ 0.9
TSPAN4-207ENST00000397411 CD36P16671 472 aa20.68■□□□□ 0.9
TSPAN4-207ENST00000397411 RAB3BP20337 219 aa20.68■□□□□ 0.9
TSPAN4-207ENST00000397411 ACTG1P63261 375 aa20.68■□□□□ 0.9
TSPAN4-207ENST00000397411 SLC9A3R2Q15599 337 aa20.68■□□□□ 0.9
TSPAN4-207ENST00000397411 NKAPLQ5M9Q1 402 aa20.68■□□□□ 0.9
TSPAN4-207ENST00000397411 FAM216AQ8WUB2 273 aa20.68■□□□□ 0.9
TSPAN4-207ENST00000397411 URM1Q9BTM9 101 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-207ENST00000397411 TMEM133Q9H2Q1 129 aa20.68■□□□□ 0.9
TSPAN4-207ENST00000397411 ETAA1Q9NY74 926 aa20.68■□□□□ 0.9
TSPAN4-207ENST00000397411 CUBNO60494 3623 aa20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 FGF9P31371 208 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 CLDN12P56749 244 aa20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 HEPN1Q6WQI6 88 aa20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 OR2W3Q7Z3T1 314 aa20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 OR51D1Q8NGF3 324 aa20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 OR13A1Q8NGR1 328 aa20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 MRGPRDQ8TDS7 321 aa20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 CCDC107Q8WV48 283 aa20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 SSMEM1Q8WWF3 244 aa20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 CHCHD6Q9BRQ6 235 aa20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 OR51E2Q9H255 320 aa20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 DPAGT1Q9H3H5 408 aa20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 KCNK15Q9H427 330 aa20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 STEAP1Q9UHE8 339 aa20.67■□□□□ 0.9
TSPAN4-207ENST00000397411 LOC100506127A0A0U1RQW1 187 aa20.66■□□□□ 0.9
TSPAN4-207ENST00000397411 KBTBD11-OT1A0A1B0GTJ5 212 aa20.66■□□□□ 0.9
TSPAN4-207ENST00000397411 UBE2QL1A1L167 161 aa20.66■□□□□ 0.9
TSPAN4-207ENST00000397411 BTBD17A6NE02 478 aa20.66■□□□□ 0.9
TSPAN4-207ENST00000397411 PDCD6O75340 191 aa20.66■□□□□ 0.9
TSPAN4-207ENST00000397411 MMP23AO75900 390 aa20.66■□□□□ 0.9
TSPAN4-207ENST00000397411 GLAP06280 429 aa20.66■□□□□ 0.9
TSPAN4-207ENST00000397411 OMGP23515 440 aa20.66■□□□□ 0.9
TSPAN4-207ENST00000397411 NFYBP25208 207 aa20.66■□□□□ 0.9
TSPAN4-207ENST00000397411 RPS27AP62979 156 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-207ENST00000397411 C2orf76Q3KRA6 126 aa20.66■□□□□ 0.9
TSPAN4-207ENST00000397411 FAM3DQ96BQ1 224 aa20.66■□□□□ 0.9
TSPAN4-207ENST00000397411 CLEC7AQ9BXN2 247 aa20.66■□□□□ 0.9
TSPAN4-207ENST00000397411 ZNF696Q9H7X3 374 aa20.66■□□□□ 0.9
TSPAN4-207ENST00000397411 RCC2Q9P258 522 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-207ENST00000397411 TRAV39A0A0B4J263 110 aa20.65■□□□□ 0.9
TSPAN4-207ENST00000397411 TMEM14DPA8MWL7 114 aa20.65■□□□□ 0.9
TSPAN4-207ENST00000397411 CLDN34H7C241 214 aa20.65■□□□□ 0.9
TSPAN4-207ENST00000397411 GZMHP20718 246 aa20.65■□□□□ 0.9
TSPAN4-207ENST00000397411 OR10A3P58181 314 aa20.65■□□□□ 0.9
TSPAN4-207ENST00000397411 PAX5Q02548 391 aa20.65■□□□□ 0.9
TSPAN4-207ENST00000397411 OR11H6Q8NGC7 330 aa20.65■□□□□ 0.9
TSPAN4-207ENST00000397411 CALYQ9NYX4 217 aa20.65■□□□□ 0.9
TSPAN4-207ENST00000397411 TRAPPC2LQ9UL33 140 aa20.65■□□□□ 0.9
TSPAN4-207ENST00000397411 AIPO00170 330 aa20.64■□□□□ 0.89
TSPAN4-207ENST00000397411 TOR1AO14656 332 aa20.64■□□□□ 0.89
TSPAN4-207ENST00000397411 MT-ND4P03905 459 aa20.64■□□□□ 0.89
TSPAN4-207ENST00000397411 GADD45AP24522 165 aa20.64■□□□□ 0.89
TSPAN4-207ENST00000397411 BLVRBP30043 206 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-207ENST00000397411 QRFPP83859 136 aa20.64■□□□□ 0.89
TSPAN4-207ENST00000397411 UNC119Q13432 240 aa20.64■□□□□ 0.89
TSPAN4-207ENST00000397411 LTC4SQ16873 150 aa20.64■□□□□ 0.89
TSPAN4-207ENST00000397411 ABHD12Q8N2K0 398 aa20.64■□□□□ 0.89
TSPAN4-207ENST00000397411 TMEM86BQ8N661 226 aa20.64■□□□□ 0.89
TSPAN4-207ENST00000397411 RFESDQ8TAC1 157 aa20.64■□□□□ 0.89
TSPAN4-207ENST00000397411 GCDHQ92947 438 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-207ENST00000397411 KCTD7Q96MP8 289 aa20.64■□□□□ 0.89
TSPAN4-207ENST00000397411 POMT1Q9Y6A1 747 aa20.64■□□□□ 0.89
TSPAN4-207ENST00000397411 IGHV2-26A0A0B4J1V2 119 aa20.63■□□□□ 0.89
TSPAN4-207ENST00000397411 SHISA3A0PJX4 238 aa20.63■□□□□ 0.89
TSPAN4-207ENST00000397411 CRYBA1P05813 215 aa20.63■□□□□ 0.89
TSPAN4-207ENST00000397411 RNASE1P07998 156 aaKnown RBP20.63■□□□□ 0.89
TSPAN4-207ENST00000397411 IER3P46695 156 aa20.63■□□□□ 0.89
TSPAN4-207ENST00000397411 C17orf58Q2M2W7 97 aa20.63■□□□□ 0.89
TSPAN4-207ENST00000397411 C16orf87Q6PH81 154 aa20.63■□□□□ 0.89
TSPAN4-207ENST00000397411 ZNF497Q6ZNH5 498 aa20.63■□□□□ 0.89
TSPAN4-207ENST00000397411 RTN4RL2Q86UN3 420 aa20.63■□□□□ 0.89
TSPAN4-207ENST00000397411 TPRA1Q86W33 373 aa20.63■□□□□ 0.89
TSPAN4-207ENST00000397411 LDLRAD3Q86YD5 345 aa20.63■□□□□ 0.89
TSPAN4-207ENST00000397411 NDNFQ8TB73 568 aa20.63■□□□□ 0.89
TSPAN4-207ENST00000397411 TM2D1Q9BX74 207 aa20.63■□□□□ 0.89
TSPAN4-207ENST00000397411 IDI2-AS1Q9NZ38 188 aa20.63■□□□□ 0.89
TSPAN4-207ENST00000397411 TBL2Q9Y4P3 447 aaKnown RBP20.63■□□□□ 0.89
TSPAN4-207ENST00000397411 SMIM30A4D0T7 59 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 FAM172BPA6NC97 362 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 IFITM5A6NNB3 132 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 CA11O75493 328 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 IGHV4-59P01825 116 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 PRRX1P54821 245 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 TIMM50Q3ZCQ8 353 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 ZNF626Q68DY1 528 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 SIGIRRQ6IA17 410 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 BEND2Q8NDZ0 799 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 OR4K15Q8NH41 348 aa20.62■□□□□ 0.89
TSPAN4-207ENST00000397411 C17orf50Q8WW18 174 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms